RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 NPY6RQ99463 290 aa12.96□□□□□ -0.33
SRRM1-216ENST00000489130 GTPBP2Q9BX10 602 aaKnown RBP12.96□□□□□ -0.33
SRRM1-216ENST00000489130 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.33
SRRM1-216ENST00000489130 GANQ9H2C0 597 aa12.96□□□□□ -0.33
SRRM1-216ENST00000489130 PDCL3Q9H2J4 239 aa12.96□□□□□ -0.33
SRRM1-216ENST00000489130 MTG2Q9H4K7 406 aa12.96□□□□□ -0.33
SRRM1-216ENST00000489130 DNAAF2Q9NVR5 837 aaKnown RBP12.96□□□□□ -0.33
SRRM1-216ENST00000489130 ERVW-1Q9UQF0 538 aa12.96□□□□□ -0.33
SRRM1-216ENST00000489130 TARSL2A2RTX5 802 aaKnown RBP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 M0QYT0 321 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 OPHN1O60890 802 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 SIN3BO75182 1162 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 PAGE1O75459 146 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 GJB3O75712 270 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 PDGFRAP16234 1089 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 CTSOP43234 321 aaPredicted RBP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 PLK1P53350 603 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 OXCT1P55809 520 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 ECT2LQ008S8 904 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 SULT2A1Q06520 285 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 ZNF252P-AS1Q0IIN9 211 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 GRIK2Q13002 908 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 AUHQ13825 339 aaKnown RBP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 C9orf64Q5T6V5 341 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 TAF3Q5VWG9 929 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 CXorf57Q6NSI4 855 aaKnown RBP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 FBXL22Q6P050 247 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 USP30Q70CQ3 517 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 FAM124AQ86V42 546 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 ERICH1Q86X53 443 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 XYLT1Q86Y38 959 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 DHX40Q8IX18 779 aaKnown RBP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 HDDC3Q8N4P3 179 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 ZCCHC9Q8N567 271 aaKnown RBP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 DEFB124Q8NES8 71 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 C1orf216Q8TAB5 229 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 IGSF8Q969P0 613 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 RPRD1AQ96P16 312 aaPredicted RBP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 ZDHHC5Q9C0B5 715 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 BTBD1Q9H0C5 482 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 VPS16Q9H269 839 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 SLC32A1Q9H598 525 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 C6orf106Q9H6K1 298 aaPredicted RBP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 SGK2Q9HBY8 427 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 PIGVQ9NUD9 493 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 FANCLQ9NW38 375 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 TMEM51Q9NW97 253 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 ARHGEF38Q9NXL2 777 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 ANGPTL2Q9UKU9 493 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 STAP1Q9ULZ2 295 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 SCML1Q9UN30 329 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.95□□□□□ -0.34
SRRM1-216ENST00000489130 HS3ST4Q9Y661 456 aa12.95□□□□□ -0.34
SRRM1-216ENST00000489130 CNOT1A5YKK6 2376 aaKnown RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 EDDM13A0A1B0GTR0 161 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 TTC34A8MYJ7 566 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 GOLGA6L22H0YM25 854 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 BCAT2O15382 392 aaPredicted RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 SEMA4FO95754 770 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 TPM2P07951 284 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 MMEP08473 750 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 TFE3P19532 575 aaPredicted RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 MZF1P28698 734 aaPredicted RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 CXCR3P49682 368 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 KLK7P49862 253 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 IRAK1P51617 712 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 JAM2P57087 298 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 NOMO3P69849 1222 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 CENPCQ03188 943 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 CST6Q15828 149 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 SLC25A52Q3SY17 297 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 C5orf22Q49AR2 442 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 BRMS1LQ5PSV4 323 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 FAM102AQ5T9C2 384 aaPredicted RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 RNF219Q5W0B1 726 aaPredicted RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 SASS6Q6UVJ0 657 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 ZNF677Q86XU0 584 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 OR2I1PQ8NGU4 316 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 MIR1-1HGQ9H1L0 117 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 PABPC3Q9H361 631 aaKnown RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 ANLNQ9NQW6 1124 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 ANO10Q9NW15 660 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 EIF2B4Q9UI10 523 aaKnown RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 SLCO3A1Q9UIG8 710 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 NOCTQ9UK39 431 aaKnown RBP12.94□□□□□ -0.34
SRRM1-216ENST00000489130 VANGL2Q9ULK5 521 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 SIK3Q9Y2K2 1263 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 DAAM1Q9Y4D1 1078 aa12.94□□□□□ -0.34
SRRM1-216ENST00000489130 GON4LQ3T8J9 2241 aa12.93□□□□□ -0.34
SRRM1-216ENST00000489130 I6L893 689 aaPredicted RBP12.93□□□□□ -0.34
SRRM1-216ENST00000489130 EPHB6O15197 1021 aa12.93□□□□□ -0.34
SRRM1-216ENST00000489130 RNASEH1O60930 286 aaKnown RBP12.93□□□□□ -0.34
SRRM1-216ENST00000489130 CLDN11O75508 207 aa12.93□□□□□ -0.34
SRRM1-216ENST00000489130 CD59P13987 128 aa12.93□□□□□ -0.34
SRRM1-216ENST00000489130 FLT3P36888 993 aa12.93□□□□□ -0.34
SRRM1-216ENST00000489130 GGCXP38435 758 aa12.93□□□□□ -0.34
SRRM1-216ENST00000489130 PI4KAP42356 2102 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms