RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ENOX1Q8TC92 643 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 GPT2Q8TD30 523 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 IGSF8Q969P0 613 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 CAMK1GQ96NX5 476 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 RPRD1AQ96P16 312 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 NAA15Q9BXJ9 866 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 BTBD1Q9H0C5 482 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 VPS16Q9H269 839 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 DNAAF2Q9NVR5 837 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 HS3ST4Q9Y661 456 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 SLCO1B1Q9Y6L6 691 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 PLXND1Q9Y4D7 1925 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 FAM47DPA6NHR8 397 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 UPK3BL1B0FP48 263 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 UPK3BL2E5RIL1 263 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 RNASEH1O60930 286 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 PAGE1O75459 146 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 DAB1O75553 588 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 FSBPO95073 299 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 TOP3BO95985 862 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 SRPRAP08240 638 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 SPINK2P20155 84 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 MATKP42679 507 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 CSNK1EP49674 416 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 STK19P49842 368 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 KLK7P49862 253 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 IRAK1P51617 712 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 FAM193AP78312 1265 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 SIM1P81133 766 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 TTC31Q49AM3 519 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 C2CD6Q53TS8 623 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 C14orf80Q86SX3 495 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 NOP9Q86U38 636 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 ERICH1Q86X53 443 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 ZDHHC17Q8IUH5 632 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 MMAAQ8IVH4 418 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 KDM1BQ8NB78 822 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 ZNF397Q8NF99 534 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 C1orf216Q8TAB5 229 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 CPA5Q8WXQ8 436 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 C18orf8Q96DM3 657 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 NPY6RQ99463 290 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 STK33Q9BYT3 514 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 ZDHHC5Q9C0B5 715 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 SIK2Q9H0K1 926 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 PCED1AQ9H1Q7 454 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 PABPC3Q9H361 631 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 IL21RQ9HBE5 538 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 PIGVQ9NUD9 493 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 FBXL12Q9NXK8 326 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 VANGL2Q9ULK5 521 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 NCKAP1Q9Y2A7 1128 aa12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-215ENST00000488920 TNRC6BQ9UPQ9 1833 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 EDDM13A0A1B0GTR0 161 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 A0A1B0GVM2 712 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 A0A1B0GVT2 93 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 TARSL2A2RTX5 802 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 TCAF2A6NFQ2 919 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 F8VZ95 297 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 MID1O15344 667 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 SH3BP5O60239 455 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 GJB3O75712 270 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 ADCY5O95622 1261 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 MMEP08473 750 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 VAV1P15498 845 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 SLC8A1P32418 973 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 CDH5P33151 784 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 GABRB2P47870 512 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 CXCR3P49682 368 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 PLK1P53350 603 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 BNC1Q01954 994 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 SLC14A1Q13336 389 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 ZNF177Q13360 481 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 SLC12A1Q13621 1099 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 KRT31Q15323 416 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 CST6Q15828 149 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 TTC39BQ5VTQ0 682 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 OTUD1Q5VV17 481 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 CDKAL1Q5VV42 579 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 CXorf57Q6NSI4 855 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 XYLT1Q86Y38 959 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 STK40Q8N2I9 435 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 OR52K2Q8NGK3 314 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 BIRC7Q96CA5 298 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 GBP4Q96PP9 640 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 FAM129BQ96TA1 746 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 FEM1AQ9BSK4 669 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 TKTL2Q9H0I9 626 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 NEUROG2Q9H2A3 272 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 WDCPQ9H6R7 721 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 GAREM1Q9H706 876 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 SGK2Q9HBY8 427 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 ANLNQ9NQW6 1124 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 FANCLQ9NW38 375 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 SERGEFQ9UGK8 458 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms