RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 AP4S1Q9Y587 144 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 PCDHB4Q9Y5E5 795 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 PCDHGA8Q9Y5G5 932 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 MICAL3Q7RTP6 2002 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 SOBPA7XYQ1 873 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 MATN1P21941 496 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 ZNF252P-AS1Q0IIN9 211 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 CES3Q6UWW8 571 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 SPATA18Q8TC71 538 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 MRPL46Q9H2W6 279 aaKnown RBP16.55■□□□□ 0.24
MCF2L-229ENST00000488765 WDR41Q9HAD4 459 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 ITM2CQ9NQX7 267 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 FBXO28Q9NVF7 368 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 WNK3Q9BYP7 1800 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 NDUFB10O96000 172 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 RFX1P22670 979 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 CDKN2BP42772 138 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 ACADVLP49748 655 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 LSM3P62310 102 aaKnown RBP16.55■□□□□ 0.24
MCF2L-229ENST00000488765 MBLAC2Q68D91 279 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 MON1BQ7L1V2 547 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 UBR7Q8N806 425 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 NETO2Q8NC67 525 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 DEPDC1BQ8WUY9 529 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 SORT1Q99523 831 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 SERPINI1Q99574 410 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 HSD17B14Q9BPX1 270 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 PNPLA3Q9NST1 481 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 TJP2Q9UDY2 1190 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 ASTN2O75129 1339 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-229ENST00000488765 GABBR2O75899 941 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 SAT1P21673 171 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 PIK3R1P27986 724 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 OPRL1P41146 370 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 PRAMEF18Q5VWM3 479 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 KCTD8Q6ZWB6 473 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 RFPL4BQ6ZWI9 263 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 MCF2L2Q86YR7 1114 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 ACDQ96AP0 544 aa16.55■□□□□ 0.24
MCF2L-229ENST00000488765 H7C0C1 242 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 HTRA2O43464 458 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-229ENST00000488765 CSDE1O75534 798 aaKnown RBP16.54■□□□□ 0.24
MCF2L-229ENST00000488765 DDHD2O94830 711 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 HSPA4LO95757 839 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 MT-ND1P03886 318 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 ITGAVP06756 1048 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 TMEM191BP0C7N4 346 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 HSPA8P11142 646 aaKnown RBP16.54■□□□□ 0.24
MCF2L-229ENST00000488765 ATP5OP48047 213 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 GTF2A2P52657 109 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 Q3C1V9 767 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 PADI6Q6TGC4 694 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 C15orf52Q6ZUT6 534 aaKnown RBP16.54■□□□□ 0.24
MCF2L-229ENST00000488765 PCYOX1LQ8NBM8 494 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 CCDC138Q96M89 665 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 SLC39A3Q9BRY0 314 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 LXNQ9BS40 222 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 ZBED2Q9BTP6 218 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 MUC3BQ9H195 1237 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 TTLL3Q9Y4R7 772 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 ZNF839A8K0R7 811 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 GAS7O60861 476 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 CHRNGP07510 517 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 ME2P23368 584 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 EEF1DP29692 281 aaKnown RBP16.54■□□□□ 0.24
MCF2L-229ENST00000488765 ZBTB17Q13105 803 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 SELENBP1Q13228 472 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 FAM214AQ32MH5 1076 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 DACT2Q5SW24 774 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 TAS2R42Q7RTR8 314 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 HAUS6Q7Z4H7 955 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 CMC1Q7Z7K0 106 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 HERC6Q8IVU3 1022 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 NLRP4Q96MN2 994 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 IL12RB2Q99665 862 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 ACO2Q99798 780 aaKnown RBP16.54■□□□□ 0.24
MCF2L-229ENST00000488765 NPLQ9BXD5 320 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-229ENST00000488765 TP63Q9H3D4 680 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-229ENST00000488765 WARS2Q9UGM6 360 aaKnown RBP16.54■□□□□ 0.24
MCF2L-229ENST00000488765 HES2Q9Y543 173 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 TEX264Q9Y6I9 313 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
MCF2L-229ENST00000488765 RNF103-CHMP3A0A140T963 221 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 BAIAP3O94812 1187 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 GSRP00390 522 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 IL1R2P27930 398 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 ALDH4A1P30038 563 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 GNA15P30679 374 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 L1CAMP32004 1257 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 LAMB2P55268 1798 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 ANKRD12Q6UB98 2062 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 CARM1Q86X55 608 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 SGCDQ92629 289 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 MXRA8Q9BRK3 442 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 WDR18Q9BV38 432 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 GLIS2Q9BZE0 524 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-229ENST00000488765 PPCSQ9HAB8 311 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 PLEKHA5Q9HAU0 1116 aa16.53■□□□□ 0.24
MCF2L-229ENST00000488765 TMEM216Q9P0N5 145 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms