RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 CEP295NLQ96MC4 621 aa20.77■□□□□ 0.91
NECAB3-213ENST00000488489 MPP6Q9NZW5 540 aa20.77■□□□□ 0.91
NECAB3-213ENST00000488489 GMNCA6NCL1 334 aa20.76■□□□□ 0.91
NECAB3-213ENST00000488489 HMBSP08397 361 aa20.76■□□□□ 0.91
NECAB3-213ENST00000488489 HTRA4P83105 476 aaPredicted RBP20.76■□□□□ 0.91
NECAB3-213ENST00000488489 NRG1Q02297 640 aaPredicted RBP20.76■□□□□ 0.91
NECAB3-213ENST00000488489 SEMA5AQ13591 1074 aa20.76■□□□□ 0.91
NECAB3-213ENST00000488489 RAB33AQ14088 237 aa20.76■□□□□ 0.91
NECAB3-213ENST00000488489 ZNF683Q8IZ20 524 aa20.76■□□□□ 0.91
NECAB3-213ENST00000488489 PYROXD1Q8WU10 500 aa20.76■□□□□ 0.91
NECAB3-213ENST00000488489 HDAC11Q96DB2 347 aa20.76■□□□□ 0.91
NECAB3-213ENST00000488489 HSFX1Q9UBD0 423 aa20.76■□□□□ 0.91
NECAB3-213ENST00000488489 CTNNAL1Q9UBT7 734 aa20.76■□□□□ 0.91
NECAB3-213ENST00000488489 RANBP2P49792 3224 aaKnown RBP20.76■□□□□ 0.91
NECAB3-213ENST00000488489 SLC12A8A0AV02 714 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 RGS16O15492 202 aaPredicted RBP20.75■□□□□ 0.91
NECAB3-213ENST00000488489 OPHN1O60890 802 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 TCEA3O75764 348 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 IGLV3-27P01718 113 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 PTPN3P26045 913 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 SSTR1P30872 391 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 TNFAIP8L3Q5GJ75 292 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 MS4A13Q5J8X5 152 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 ZNF534Q76KX8 674 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 ARHGAP12Q8IWW6 846 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 DPF3Q92784 378 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 VANGL2Q9ULK5 521 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 YIPF1Q9Y548 306 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 LILRB3O75022 631 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 FGF18O76093 207 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 MX2P20592 715 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 HTR7P34969 479 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 GRIA1P42261 906 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 PPARDQ03181 441 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 ARHGAP36Q6ZRI8 547 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 ZNF512Q96ME7 567 aaPredicted RBP20.75■□□□□ 0.91
NECAB3-213ENST00000488489 VPS37BQ9H9H4 285 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 MRPL17Q9NRX2 175 aaKnown RBP20.75■□□□□ 0.91
NECAB3-213ENST00000488489 TEX264Q9Y6I9 313 aa20.75■□□□□ 0.91
NECAB3-213ENST00000488489 DOCK4Q8N1I0 1966 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 ZNF840PA6NDX5 716 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 TEX28O15482 410 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 FGF10O15520 208 aaPredicted RBP20.74■□□□□ 0.91
NECAB3-213ENST00000488489 APOEP02649 317 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 ELK3P41970 407 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 FPGSQ05932 587 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 PPIGQ13427 754 aaKnown RBP eCLIP20.74■□□□□ 0.919e-10■■■■□ 19.7
NECAB3-213ENST00000488489 ZSCAN18Q8TBC5 510 aaPredicted RBP20.74■□□□□ 0.91
NECAB3-213ENST00000488489 MCOLN1Q9GZU1 580 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 CATSPERBQ9H7T0 1116 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 CHMP2BQ9UQN3 213 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 PCDHB12Q9Y5F1 795 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 STK10O94804 968 aaKnown RBP20.74■□□□□ 0.91
NECAB3-213ENST00000488489 TPSB2P20231 275 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 PSMB4P28070 264 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 GCAP28676 217 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 PPM1AP35813 382 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 ZBTB17Q13105 803 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 CBLBQ13191 982 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 STAT4Q14765 748 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 TPSAB1Q15661 275 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 SNX30Q5VWJ9 437 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 PPP1R21Q6ZMI0 780 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 PID1Q7Z2X4 250 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 CROCCP2Q86T23 111 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 MCUQ8NE86 351 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 BTN2A3PQ96KV6 586 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 MYRFLQ96LU7 910 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 FERMT1Q9BQL6 677 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 BRD8Q9H0E9 1235 aa20.74■□□□□ 0.91
NECAB3-213ENST00000488489 H0YHG0 523 aa20.73■□□□□ 0.91
NECAB3-213ENST00000488489 ALDH1A3P47895 512 aa20.73■□□□□ 0.91
NECAB3-213ENST00000488489 KCNQ1P51787 676 aa20.73■□□□□ 0.91
NECAB3-213ENST00000488489 IFT88Q13099 833 aa20.73■□□□□ 0.91
NECAB3-213ENST00000488489 TMEM240Q5SV17 173 aa20.73■□□□□ 0.91
NECAB3-213ENST00000488489 SWT1Q5T5J6 900 aaKnown RBP20.73■□□□□ 0.91
NECAB3-213ENST00000488489 RNF187Q5TA31 235 aaPredicted RBP20.73■□□□□ 0.91
NECAB3-213ENST00000488489 C3orf62Q6ZUJ4 267 aa20.73■□□□□ 0.91
NECAB3-213ENST00000488489 FIBCD1Q8N539 461 aa20.73■□□□□ 0.91
NECAB3-213ENST00000488489 SLC39A8Q9C0K1 460 aa20.73■□□□□ 0.91
NECAB3-213ENST00000488489 PRKAG2Q9UGJ0 569 aa20.73■□□□□ 0.91
NECAB3-213ENST00000488489 FOXO6A8MYZ6 492 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 DFFAO00273 331 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 SPATA31D3P0C874 917 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CSH1P0DML2 217 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CSH2P0DML3 217 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 FDFT1P37268 417 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 MAGEA3P43357 314 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 RING1Q06587 406 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 ACTN3Q08043 901 aaPredicted RBP20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CCDC38Q502W7 563 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 SPATA31D4Q6ZUB0 917 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CYP4X1Q8N118 509 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 PDCD7Q8N8D1 485 aaKnown RBP20.72■□□□□ 0.91
NECAB3-213ENST00000488489 RTL3Q8N8U3 475 aaKnown RBP20.72■□□□□ 0.91
NECAB3-213ENST00000488489 ATP6V0D2Q8N8Y2 350 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 GORASP1Q9BQQ3 440 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 EURLQ9NYK6 297 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CARNS1A5YM72 827 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 PRRG1O14668 218 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms