RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 FAM72AQ5TYM5 149 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 FAM72DQ6L9T8 149 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 CCDC70Q6NSX1 233 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 CTAGE6Q86UF2 777 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 FAM72BQ86X60 149 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 CTAGE4Q8IX94 777 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 ADGRG2Q8IZP9 1017 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 UMODL1-AS1Q8N2C9 162 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 CPA6Q8N4T0 437 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 PLD5Q8N7P1 536 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 TTC16Q8NEE8 873 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 MAFAQ8NHW3 353 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-242ENST00000488013 DDI1Q8WTU0 396 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 PPM1EQ8WY54 764 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 IRF7Q92985 503 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 TRMT61BQ9BVS5 477 aaKnown RBP11.36□□□□□ -0.59
HDLBP-242ENST00000488013 HEMGNQ9BXL5 484 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 SMG9Q9H0W8 520 aaKnown RBP11.36□□□□□ -0.59
HDLBP-242ENST00000488013 SPHK2Q9NRA0 654 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 PRKAG3Q9UGI9 489 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 TBC1D30Q9Y2I9 924 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 PLXNA3P51805 1871 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 MYO9BQ13459 2157 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 ILVBLA1L0T0 632 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 CFAP69A5D8W1 941 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 GRXCR2A6NFK2 248 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 ARHGAP42A6NI28 874 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 NRG2O14511 850 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-242ENST00000488013 HOXC11O43248 304 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-242ENST00000488013 RAMP2O60895 175 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 LUC7L3O95232 432 aaKnown RBP11.35□□□□□ -0.59
HDLBP-242ENST00000488013 PENKP01210 267 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-242ENST00000488013 KRT10P13645 584 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 AMPD1P23109 780 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 FCARP24071 287 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 OR1E1P30953 314 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 STIP1P31948 543 aaKnown RBP11.35□□□□□ -0.59
HDLBP-242ENST00000488013 CHRNA3P32297 505 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 VIPR2P41587 438 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 FNTAP49354 379 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 MMRN1Q13201 1228 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 CDH18Q13634 790 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 TMCO4Q5TGY1 634 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 RNF43Q68DV7 783 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 TANGO2Q6ICL3 276 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 PTCRAQ6ISU1 281 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-242ENST00000488013 C1orf228Q6PIY5 440 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 C14orf80Q86SX3 495 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 NLRP14Q86W24 1093 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 PQLC3Q8N755 202 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 GRK7Q8WTQ7 553 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 NKD2Q969F2 451 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-242ENST00000488013 CAPZA3Q96KX2 299 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 XPO6Q96QU8 1125 aaKnown RBP11.35□□□□□ -0.59
HDLBP-242ENST00000488013 FAM83CQ9BQN1 747 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 MAGEH1Q9H213 219 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 LRRC19Q9H756 370 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 TRPV5Q9NQA5 729 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 TMPRSS4Q9NRS4 437 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 RYDENQ9NUL5 291 aaKnown RBP11.35□□□□□ -0.59
HDLBP-242ENST00000488013 CDH23Q9H251 3354 aa11.35□□□□□ -0.59
HDLBP-242ENST00000488013 GOLGA6L7A0A1B0GV03 622 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 H0Y626 953 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 ZNF185O15231 689 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 TBL1XO60907 577 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 STK10O94804 968 aaKnown RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 SLC6A4P31645 630 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 GEMIN4P57678 1058 aaKnown RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 PFKPQ01813 784 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 HTR4Q13639 388 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 DMC1Q14565 340 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 DHCR24Q15392 516 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 CYP1B1Q16678 543 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 EML3Q32P44 896 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 NCBP2-AS2Q69YL0 99 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 TIGD7Q6NT04 549 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 RFWD3Q6PCD5 774 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 NUDT18Q6ZVK8 323 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 MAATS1Q7Z4T9 603 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 CDKL3Q8IVW4 592 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 C12orf50Q8NA57 414 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 SPATA4Q8NEY3 305 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 CCDC26Q8TAB7 109 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 FIBINQ8TAL6 211 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 CCHCR1Q8TD31 782 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 NSMCE1Q8WV22 266 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 FATE1Q969F0 183 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 IGSF8Q969P0 613 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 MAGOHBQ96A72 148 aaKnown RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 MSANTD3Q96H12 275 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 MS4A14Q96JA4 679 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 BBS2Q9BXC9 721 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 MPP6Q9NZW5 540 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 KIAA1522Q9P206 1035 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 HPCAL4Q9UM19 191 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 DRG1Q9Y295 367 aaKnown RBP11.34□□□□□ -0.59
HDLBP-242ENST00000488013 A0A0C4DFX4 3053 aa11.34□□□□□ -0.59
HDLBP-242ENST00000488013 ZSCAN5CA6NGD5 496 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms