RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 TRDMT1O14717 391 aaKnown RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 SCAMP3O14828 347 aaKnown RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 NCAM2O15394 837 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 CTIFO43310 598 aaKnown RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 MFSD11O43934 449 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 TSPAN3O60637 253 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 CLDN11O75508 207 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 ITGAVP06756 1048 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 RBP3P10745 1247 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 CHKAP35790 457 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 ATP5OP48047 213 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 MAPKAPK2P49137 400 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 TERF1P54274 439 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 CDH4P55283 916 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 RPS24P62847 133 aaKnown RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 MRPS25P82663 173 aaKnown RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 LMNB2Q03252 620 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 PDK1Q15118 436 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 ERCC6LQ2NKX8 1250 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 FAM78AQ5JUQ0 283 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 TTC39BQ5VTQ0 682 aaPredicted RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 AFMIDQ63HM1 303 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 C8orf74Q6P047 294 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 DARS2Q6PI48 645 aaKnown RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 CHST9Q7L1S5 443 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 GET4Q7L5D6 327 aaPredicted RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 ZC3H18Q86VM9 953 aaKnown RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 BBS7Q8IWZ6 715 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 TP53INP2Q8IXH6 220 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 UMODL1-AS1Q8N2C9 162 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 ALLCQ8N6M5 410 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 NPWQ8N729 165 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 TTC16Q8NEE8 873 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 RIN3Q8TB24 985 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 GRK7Q8WTQ7 553 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 SMARCD2Q92925 531 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 SLCO2A1Q92959 643 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 TMA16Q96EY4 203 aaKnown RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 ASB16Q96NS5 453 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 OLFM3Q96PB7 478 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 SLC39A8Q9C0K1 460 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 BRD8Q9H0E9 1235 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 TRPV4Q9HBA0 871 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 NDFIP2Q9NV92 336 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 OBP2AQ9NY56 170 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 TBC1D14Q9P2M4 693 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 ZNF212Q9UDV6 495 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.23□□□□□ -1.09
RBM28-206ENST00000487602 CDH7Q9ULB5 785 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 ZNF148Q9UQR1 794 aa8.23□□□□□ -1.09
RBM28-206ENST00000487602 V9GYY5 206 aaPredicted RBP8.23□□□□□ -1.09
RBM28-206ENST00000487602 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 TARSL2A2RTX5 802 aaKnown RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 CFAP69A5D8W1 941 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 BHMG1C9JSJ3 638 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 SLC9A3R1O14745 358 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 TTI1O43156 1089 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 TBL1XO60907 577 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 MAP3K6O95382 1288 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 ECEL1O95672 775 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 RHOXF2BP0C7M4 288 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 MX2P20592 715 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 STIP1P31948 543 aaKnown RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 VIPR2P41587 438 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 SGSHP51688 502 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 NDST2P52849 883 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 SLC7A5Q01650 507 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 DR1Q01658 176 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 GALNT2Q10471 571 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 ZNF177Q13360 481 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 NAA30Q147X3 362 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 MPPE1Q53F39 396 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 SLC45A4Q5BKX6 768 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 SYDE1Q6ZW31 735 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 TFAP2DQ7Z6R9 452 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 CIR1Q86X95 450 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 JAMLQ86YT9 394 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 LRRC49Q8IUZ0 686 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 CDKL3Q8IVW4 592 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 ARHGAP12Q8IWW6 846 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 CFAP52Q8N1V2 620 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 CCDC33Q8N5R6 958 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 TDRD5Q8NAT2 981 aaKnown RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 NETO2Q8NC67 525 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 HJURPQ8NCD3 748 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 SMRP1Q8NCR6 262 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 TFB1MQ8WVM0 346 aaKnown RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 MYLIPQ8WY64 445 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 SUSD6Q92537 303 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 E2F7Q96AV8 911 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 OTUB2Q96DC9 234 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 RSPRY1Q96DX4 576 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 CELF6Q96J87 481 aaKnown RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 CCDC114Q96M63 670 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 PRICKLE1Q96MT3 831 aaPredicted RBP8.22□□□□□ -1.09
RBM28-206ENST00000487602 NECTIN4Q96NY8 510 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 LRRC3BQ96PB8 259 aa8.22□□□□□ -1.09
RBM28-206ENST00000487602 QKIQ96PU8 341 aaKnown RBP eCLIP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms