RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 OLFML1Q6UWY5 402 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 CIR1Q86X95 450 aaPredicted RBP24.36■■□□□ 1.49
PLOD3-215ENST00000487563 FAM71AQ8IYT1 594 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 CCAR2Q8N163 923 aaKnown RBP24.36■■□□□ 1.49
PLOD3-215ENST00000487563 RPRD1AQ96P16 312 aaPredicted RBP24.36■■□□□ 1.49
PLOD3-215ENST00000487563 PABPC3Q9H361 631 aaKnown RBP24.36■■□□□ 1.49
PLOD3-215ENST00000487563 PCDHB9Q9Y5E1 797 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 EDDM13A0A1B0GTR0 161 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 A0A1B0GVM2 712 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 TCAF2A6NFQ2 919 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 TTC34A8MYJ7 566 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 SH3BP5O60239 455 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 GJB3O75712 270 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 C7P10643 843 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 PDGFRAP16234 1089 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 NNMTP40261 264 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 MATKP42679 507 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 AFF3P51826 1226 aaKnown RBP24.35■■□□□ 1.49
PLOD3-215ENST00000487563 SLC6A3Q01959 620 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 MTA1Q13330 715 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 EIF4EBP2Q13542 120 aaPredicted RBP24.35■■□□□ 1.49
PLOD3-215ENST00000487563 SLC12A1Q13621 1099 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 DRAP1Q14919 205 aaPredicted RBP24.35■■□□□ 1.49
PLOD3-215ENST00000487563 TEAD4Q15561 434 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 LRSAM1Q6UWE0 723 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 SLC26A9Q7LBE3 791 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 NAXDQ8IW45 347 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 APCDD1Q8J025 514 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 PRMT1Q99873 361 aaKnown RBP24.35■■□□□ 1.49
PLOD3-215ENST00000487563 ADAM33Q9BZ11 813 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 GAREM1Q9H706 876 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 FBXL12Q9NXK8 326 aa24.35■■□□□ 1.49
PLOD3-215ENST00000487563 NUMA1Q14980 2115 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 TARSL2A2RTX5 802 aaKnown RBP24.34■■□□□ 1.49
PLOD3-215ENST00000487563 FAM47DPA6NHR8 397 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 TOP3BO95985 862 aaKnown RBP24.34■■□□□ 1.49
PLOD3-215ENST00000487563 NUMBP49757 651 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 OXCT1P55809 520 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 ARID5BQ14865 1188 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 CST6Q15828 149 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 USP30Q70CQ3 517 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 ZDHHC17Q8IUH5 632 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 TMEM35BQ8NCS4 154 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 BIRC7Q96CA5 298 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 RPL10LQ96L21 214 aaKnown RBP24.34■■□□□ 1.49
PLOD3-215ENST00000487563 OMDQ99983 421 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 SCNM1Q9BWG6 230 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 FHOD1Q9Y613 1164 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 ITIH6Q6UXX5 1313 aa24.34■■□□□ 1.49
PLOD3-215ENST00000487563 CEP295Q9C0D2 2601 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 A0A1B0GVT2 93 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 M0QYT0 321 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 NOS2P35228 1153 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 PSMD8P48556 350 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 CSNK1EP49674 416 aaKnown RBP24.33■■□□□ 1.49
PLOD3-215ENST00000487563 CENPCQ03188 943 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 SULT2A1Q06520 285 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 C9orf64Q5T6V5 341 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 FBXL22Q6P050 247 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 UNQ6494/PRO21346Q6UXR6 183 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 MMAAQ8IVH4 418 aaKnown RBP24.33■■□□□ 1.49
PLOD3-215ENST00000487563 CAMK1GQ96NX5 476 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 SAMSN1Q9NSI8 373 aaKnown RBP24.33■■□□□ 1.49
PLOD3-215ENST00000487563 RRN3Q9NYV6 651 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 SLCO3A1Q9UIG8 710 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 VANGL2Q9ULK5 521 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 WASF3Q9UPY6 502 aa24.33■■□□□ 1.49
PLOD3-215ENST00000487563 A0A1W2PP55 124 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 MID1O15344 667 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 HYAL3O43820 417 aaPredicted RBP24.32■■□□□ 1.48
PLOD3-215ENST00000487563 RNASEH2AO75792 299 aaKnown RBP24.32■■□□□ 1.48
PLOD3-215ENST00000487563 KRT37O76014 449 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 EEF1GP26641 437 aaKnown RBP24.32■■□□□ 1.48
PLOD3-215ENST00000487563 STK19P49842 368 aaPredicted RBP24.32■■□□□ 1.48
PLOD3-215ENST00000487563 RNASE9P60153 205 aaKnown RBP24.32■■□□□ 1.48
PLOD3-215ENST00000487563 FAM193AP78312 1265 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 AUHQ13825 339 aaKnown RBP24.32■■□□□ 1.48
PLOD3-215ENST00000487563 KLHDC7AQ5VTJ3 777 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 TAF3Q5VWG9 929 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 ADAT2Q7Z6V5 191 aaKnown RBP24.32■■□□□ 1.48
PLOD3-215ENST00000487563 ZNF397Q8NF99 534 aaPredicted RBP24.32■■□□□ 1.48
PLOD3-215ENST00000487563 C1orf216Q8TAB5 229 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 PPP1R9BQ96SB3 815 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 IL21RQ9HBE5 538 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 TM9SF3Q9HD45 589 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 STAP1Q9ULZ2 295 aa24.32■■□□□ 1.48
PLOD3-215ENST00000487563 PCNX2A6NKB5 2137 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 TRIM16O95361 564 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 CYP11B1P15538 503 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 CD27P26842 260 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 MZF1P28698 734 aaPredicted RBP24.31■■□□□ 1.48
PLOD3-215ENST00000487563 GGCXP38435 758 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 SULT1E1P49888 294 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 KCNMA1Q12791 1236 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 TRIP6Q15654 476 aaKnown RBP24.31■■□□□ 1.48
PLOD3-215ENST00000487563 HLA-BQ31612 363 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 TCP11X2Q5H9J9 407 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 CT47A1Q5JQC4 288 aaPredicted RBP24.31■■□□□ 1.48
PLOD3-215ENST00000487563 KIAA0895LQ68EN5 471 aa24.31■■□□□ 1.48
PLOD3-215ENST00000487563 SND1Q7KZF4 910 aaKnown RBP eCLIP24.31■■□□□ 1.487e-8■■□□□ 12.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms