RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 TBC1D3HP0C7X1 549 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 SKOR1P84550 965 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 STAT4Q14765 748 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 KMT5BQ4FZB7 885 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 TBC1D3GQ6DHY5 549 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 TBC1D3CQ6IPX1 549 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 FAM173BQ6P4H8 233 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 RFWD3Q6PCD5 774 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 TBC1D3Q8IZP1 549 aaPredicted RBP15.78■□□□□ 0.12
NME1-208ENST00000487481 FIBINQ8TAL6 211 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 DHX58Q96C10 678 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 HEXIM2Q96MH2 286 aaKnown RBP15.78■□□□□ 0.12
NME1-208ENST00000487481 FAM129BQ96TA1 746 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 ULBP1Q9BZM6 244 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 TRIM4Q9C037 500 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 MAGEF1Q9HAY2 307 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 ARHGAP20Q9P2F6 1191 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 TJP2Q9UDY2 1190 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 CYTH4Q9UIA0 394 aa15.78■□□□□ 0.12
NME1-208ENST00000487481 INTS6Q9UL03 887 aaKnown RBP15.78■□□□□ 0.12
NME1-208ENST00000487481 TYW5A2RUC4 315 aaKnown RBP15.77■□□□□ 0.12
NME1-208ENST00000487481 TTC34A8MYJ7 566 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 MSI1O43347 362 aaKnown RBP15.77■□□□□ 0.12
NME1-208ENST00000487481 KRT10P13645 584 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 PDCP20941 246 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 DGKAP23743 735 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 MZF1P28698 734 aaPredicted RBP15.77■□□□□ 0.12
NME1-208ENST00000487481 SLC11A2P49281 568 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 NFATC3Q12968 1075 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 ELAVL3Q14576 367 aaKnown RBP15.77■□□□□ 0.12
NME1-208ENST00000487481 ZNF394Q53GI3 561 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 FAM133BQ5BKY9 247 aaKnown RBP15.77■□□□□ 0.12
NME1-208ENST00000487481 IQUBQ8NA54 791 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 ANKRD52Q8NB46 1076 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 HJURPQ8NCD3 748 aaPredicted RBP15.77■□□□□ 0.12
NME1-208ENST00000487481 FAM131CQ96AQ9 280 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 USP28Q96RU2 1077 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 EVA1BQ9NVM1 165 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 ERVW-1Q9UQF0 538 aa15.77■□□□□ 0.12
NME1-208ENST00000487481 TLN1Q9Y490 2541 aaKnown RBP15.76■□□□□ 0.11
NME1-208ENST00000487481 PRAMEF26H0Y7S4 382 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 TERTO14746 1132 aaKnown RBP15.76■□□□□ 0.11
NME1-208ENST00000487481 SLC7A4O43246 635 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 IL1BP01584 269 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 IGLV3-27P01718 113 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 ALPPL2P10696 532 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 RBMS1P29558 406 aaKnown RBP15.76■□□□□ 0.11
NME1-208ENST00000487481 DRD3P35462 400 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 CDH18Q13634 790 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 SETMARQ53H47 684 aaPredicted RBP15.76■□□□□ 0.11
NME1-208ENST00000487481 C3orf38Q5JPI3 329 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 C1orf220Q5T0J3 134 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 BSPRYQ5W0U4 402 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 NUGGCQ68CJ6 796 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 ARHGAP17Q68EM7 881 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 CCDC81Q6ZN84 652 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 TMC6Q7Z403 805 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 TRIM69Q86WT6 500 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 UNC45BQ8IWX7 931 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 STK40Q8N2I9 435 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 TTC39CQ8N584 583 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 CCDC150Q8NCX0 1101 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 NDRG1Q92597 394 aaKnown RBP15.76■□□□□ 0.11
NME1-208ENST00000487481 EDEM1Q92611 657 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 GRAMD1AQ96CP6 724 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 IPO9Q96P70 1041 aaKnown RBP15.76■□□□□ 0.11
NME1-208ENST00000487481 ABCG4Q9H172 646 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 USP29Q9HBJ7 922 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 STIM2Q9P246 746 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 SATB2Q9UPW6 733 aa15.76■□□□□ 0.11
NME1-208ENST00000487481 COL27A1Q8IZC6 1860 aaPredicted RBP15.76■□□□□ 0.11
NME1-208ENST00000487481 PVALEFA0A1B0GWK0 134 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 XPO1O14980 1071 aaKnown RBP15.75■□□□□ 0.11
NME1-208ENST00000487481 FFAR2O15552 330 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 PLRG1O43660 514 aaKnown RBP15.75■□□□□ 0.11
NME1-208ENST00000487481 NR3C1P04150 777 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 MAT2AP31153 395 aaKnown RBP15.75■□□□□ 0.11
NME1-208ENST00000487481 SLC6A4P31645 630 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 DUSP3P51452 185 aaPredicted RBP15.75■□□□□ 0.11
NME1-208ENST00000487481 ISXQ2M1V0 245 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 SGO2Q562F6 1265 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 PITRM1Q5JRX3 1037 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 COLEC12Q5KU26 742 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 C6orf132Q5T0Z8 1188 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 RNF219Q5W0B1 726 aaPredicted RBP15.75■□□□□ 0.11
NME1-208ENST00000487481 MSANTD2Q6P1R3 559 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.75■□□□□ 0.11
NME1-208ENST00000487481 CCDC117Q8IWD4 279 aaPredicted RBP15.75■□□□□ 0.11
NME1-208ENST00000487481 TAS1R2Q8TE23 839 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 KLHDC7BQ96G42 594 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 PRICKLE1Q96MT3 831 aaPredicted RBP15.75■□□□□ 0.11
NME1-208ENST00000487481 SLC46A1Q96NT5 459 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 LRRC4Q9HBW1 653 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 ABCC13Q9NSE7 274 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 KLHL11Q9NVR0 708 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 UCKL1Q9NWZ5 548 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 NLGN3Q9NZ94 848 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 FRMD4BQ9Y2L6 1034 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 PCDHGA8Q9Y5G5 932 aa15.75■□□□□ 0.11
NME1-208ENST00000487481 GOLGA6L7A0A1B0GV03 622 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms