RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 SERGEFQ9UGK8 458 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 RWDD2AQ9UIY3 292 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 NCKAP1Q9Y2A7 1128 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 BTBD3Q9Y2F9 522 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 PCDHGB2Q9Y5G2 931 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 ASPMQ8IZT6 3477 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
VPS16-208ENST00000487461 KCNU1A8MYU2 1149 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 TAF4O00268 1085 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 MID1O15344 667 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 RNASEH1O60930 286 aaKnown RBP12.61□□□□□ -0.39
VPS16-208ENST00000487461 APOEP02649 317 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 USP8P40818 1118 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 GRIA4P48058 902 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 ECT2LQ008S8 904 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 PDCLQ13371 301 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 SUZ12Q15022 739 aaKnown RBP12.61□□□□□ -0.39
VPS16-208ENST00000487461 TEAD4Q15561 434 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 CST6Q15828 149 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 CAMK4Q16566 473 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 KIAA0895LQ68EN5 471 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 CHSY1Q86X52 802 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 MMAAQ8IVH4 418 aaKnown RBP12.61□□□□□ -0.39
VPS16-208ENST00000487461 DEFB106AQ8N104 65 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 ATP6V0D2Q8N8Y2 350 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 BAHD1Q8TBE0 780 aaPredicted RBP12.61□□□□□ -0.39
VPS16-208ENST00000487461 RPL10LQ96L21 214 aaKnown RBP12.61□□□□□ -0.39
VPS16-208ENST00000487461 PRMT1Q99873 361 aaKnown RBP12.61□□□□□ -0.39
VPS16-208ENST00000487461 TRIM62Q9BVG3 475 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 EBF2Q9HAK2 575 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.61□□□□□ -0.39
VPS16-208ENST00000487461 TOR4AQ9NXH8 423 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 SCML1Q9UN30 329 aa12.61□□□□□ -0.39
VPS16-208ENST00000487461 APOBEC2Q9Y235 224 aaKnown RBP12.61□□□□□ -0.39
VPS16-208ENST00000487461 A0A1W2PP55 124 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 FAM47DPA6NHR8 397 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 MOCS3O95396 460 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 ATXN1LP0C7T5 689 aaKnown RBP12.6□□□□□ -0.39
VPS16-208ENST00000487461 PON1P27169 355 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 SLC8A1P32418 973 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 NUMBP49757 651 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 STK19P49842 368 aaPredicted RBP12.6□□□□□ -0.39
VPS16-208ENST00000487461 CDK17Q00537 523 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 NCEH1Q6PIU2 408 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 CCNI2Q6ZMN8 369 aaPredicted RBP12.6□□□□□ -0.39
VPS16-208ENST00000487461 GBP6Q6ZN66 633 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 CIR1Q86X95 450 aaPredicted RBP12.6□□□□□ -0.39
VPS16-208ENST00000487461 STK40Q8N2I9 435 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 SHC3Q92529 594 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 PTPRN2Q92932 1015 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 PPP1R13BQ96KQ4 1090 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 FAM81BQ96LP2 452 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 SLC2A13Q96QE2 648 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 CPXM1Q96SM3 734 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 APEX2Q9UBZ4 518 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 ADAMTS1Q9UHI8 967 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 SLC12A6Q9UHW9 1150 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 ITIH6Q6UXX5 1313 aa12.6□□□□□ -0.39
VPS16-208ENST00000487461 SYNJ2BP-COX16A0A087WUM0 186 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 A0A1W2PPC4 97 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 C10orf142B7Z368 130 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 F5H5T6 163 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 H0Y8X5 98 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 FLRT2O43155 660 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 GRAP2O75791 330 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 RNASEH2AO75792 299 aaKnown RBP12.59□□□□□ -0.39
VPS16-208ENST00000487461 GLI1P08151 1106 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 VAV1P15498 845 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 MZF1P28698 734 aaPredicted RBP12.59□□□□□ -0.39
VPS16-208ENST00000487461 CTSKP43235 329 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 PLK1P53350 603 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 SCAPQ12770 1279 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
VPS16-208ENST00000487461 EXOC3L4Q17RC7 722 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 EFHC1Q5JVL4 640 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 FBXL22Q6P050 247 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 PASD1Q8IV76 773 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 CCAR2Q8N163 923 aaKnown RBP12.59□□□□□ -0.39
VPS16-208ENST00000487461 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 OR2T34Q8NGX1 318 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 IGSF8Q969P0 613 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 SLC6A18Q96N87 628 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 CDC6Q99741 560 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 OMDQ99983 421 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 FAM204AQ9H8W3 233 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 SIX2Q9NPC8 291 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 ASNSD1Q9NWL6 643 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 DDIT4Q9NX09 232 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 COX16Q9P0S2 106 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 AJAP1Q9UKB5 411 aaPredicted RBP12.59□□□□□ -0.39
VPS16-208ENST00000487461 PCDHGC3Q9UN70 934 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 CEP83Q9Y592 693 aa12.59□□□□□ -0.39
VPS16-208ENST00000487461 GTPBP10A4D1E9 387 aaKnown RBP12.58□□□□□ -0.4
VPS16-208ENST00000487461 LRRC72A6NJI9 287 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 GOLGA8CPA6NN73 597 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 FOXN3O00409 490 aaPredicted RBP12.58□□□□□ -0.4
VPS16-208ENST00000487461 WNT9AO14904 365 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 VILLO15195 856 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms