RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 LTFP02788 710 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 PAX3P23760 479 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 CLCNKBP51801 687 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 SEMA3BQ13214 749 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 DNAL1Q4LDG9 190 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 CASC4Q6P4E1 433 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 DNAJC9Q8WXX5 260 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 IRGQQ8WZA9 623 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 SMARCD1Q96GM5 515 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 ZNF333Q96JL9 665 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 C20orf27Q9GZN8 174 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 C1orf21Q9H246 121 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 WDR6Q9NNW5 1121 aaKnown RBP26.76■■□□□ 1.87
HLA-C-208ENST00000487245 STX18Q9P2W9 335 aaKnown RBP26.76■■□□□ 1.87
HLA-C-208ENST00000487245 CORO1CQ9ULV4 474 aaPredicted RBP26.76■■□□□ 1.87
HLA-C-208ENST00000487245 PLA2G4CQ9UP65 541 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 MYBPHLA2RUH7 354 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 YJEFN3A6XGL0 299 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 PLIN3O60664 434 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 ALDOAP04075 364 aaKnown RBP26.75■■□□□ 1.87
HLA-C-208ENST00000487245 SLC34A1Q06495 639 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 FRG1Q14331 258 aaKnown RBP26.75■■□□□ 1.87
HLA-C-208ENST00000487245 ZNF567Q8N184 647 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 ATP2A3Q93084 1043 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 FAM96AQ9H5X1 160 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 ZNF395Q9H8N7 513 aaPredicted RBP26.75■■□□□ 1.87
HLA-C-208ENST00000487245 SPC25Q9HBM1 224 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 TMPRSS4Q9NRS4 437 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 MIOSQ9NXC5 875 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 SEPT10Q9P0V9 454 aa26.75■■□□□ 1.87
HLA-C-208ENST00000487245 MYADML2A6NDP7 307 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 ARL5CA6NH57 179 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 MEIS3P2A8K0S8 358 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 SPECC1L-ADORA2AF8WAN1 911 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 FGF3P11487 239 aaPredicted RBP26.74■■□□□ 1.87
HLA-C-208ENST00000487245 ERCC2P18074 760 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 MGAT1P26572 445 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 PSMB4P28070 264 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 TPI1P60174 286 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 RCN1Q15293 331 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 NET1Q7Z628 596 aaPredicted RBP26.74■■□□□ 1.87
HLA-C-208ENST00000487245 IFNL1Q8IU54 200 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 LMNTD2Q8IXW0 634 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 ZMIZ2Q8NF64 920 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 NVLO15381 856 aaKnown RBP26.74■■□□□ 1.87
HLA-C-208ENST00000487245 NCAM1P13591 858 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 MX2P20592 715 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 PDE1CQ14123 709 aaPredicted RBP26.74■■□□□ 1.87
HLA-C-208ENST00000487245 CCDC6Q16204 474 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 SPANXN3Q5MJ09 141 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 TEDDM1Q5T9Z0 273 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 GDF6Q6KF10 455 aaPredicted RBP26.74■■□□□ 1.87
HLA-C-208ENST00000487245 PID1Q7Z2X4 250 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 SERINC5Q86VE9 423 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 METTL23Q86XA0 190 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 WDR60Q8WVS4 1066 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 ISL2Q96A47 359 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 UPF3AQ9H1J1 476 aaKnown RBP26.74■■□□□ 1.87
HLA-C-208ENST00000487245 CSNK1G1Q9HCP0 422 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 NR2E3Q9Y5X4 410 aa26.74■■□□□ 1.87
HLA-C-208ENST00000487245 TRPM7Q96QT4 1865 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 A6NHS1 94 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 TPP1O14773 563 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 KRT36O76013 467 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 CHRNA1P02708 482 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 ENO1P06733 434 aaKnown RBP26.73■■□□□ 1.87
HLA-C-208ENST00000487245 ODC1P11926 461 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 AOC1P19801 751 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 IGFBP6P24592 240 aaPredicted RBP26.73■■□□□ 1.87
HLA-C-208ENST00000487245 RAB27AP51159 221 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 N4BP2L1Q5TBK1 243 aaPredicted RBP26.73■■□□□ 1.87
HLA-C-208ENST00000487245 WDR75Q8IWA0 830 aaKnown RBP26.73■■□□□ 1.87
HLA-C-208ENST00000487245 KIRREL3Q8IZU9 778 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 SCML4Q8N228 414 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 ZNF212Q9UDV6 495 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 ADAM28Q9UKQ2 775 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 SUFUQ9UMX1 484 aa26.73■■□□□ 1.87
HLA-C-208ENST00000487245 HHLA1C9JL84 531 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 ZNF623O75123 536 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 TM7SF2O76062 418 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 USP17L7P0C7H9 530 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 GRK2P25098 689 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 SESN2P58004 480 aaPredicted RBP26.72■■□□□ 1.87
HLA-C-208ENST00000487245 AGMOQ6ZNB7 445 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 UNC5BQ8IZJ1 945 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 RNF169Q8NCN4 708 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 RBM15BQ8NDT2 890 aaKnown RBP26.72■■□□□ 1.87
HLA-C-208ENST00000487245 TRPV1Q8NER1 839 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 PIWIL2Q8TC59 973 aaKnown RBP26.72■■□□□ 1.87
HLA-C-208ENST00000487245 STMN2Q93045 179 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 PGBD4Q96DM1 585 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 TRIM62Q9BVG3 475 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 DDIT4Q9NX09 232 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 ERI2A8K979 691 aaKnown RBP26.72■■□□□ 1.87
HLA-C-208ENST00000487245 SERPINE1P05121 402 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 ITGA2BP08514 1039 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 MAGEA12P43365 314 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 SCNN1GP51170 649 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 PPIDQ08752 370 aaKnown RBP26.72■■□□□ 1.87
HLA-C-208ENST00000487245 MGAT3Q09327 533 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms