RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 NUCKS1Q9H1E3 243 aaKnown RBP20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 GOLPH3LQ9H4A5 285 aa20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 ITIH6Q6UXX5 1313 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 SLC16A3O15427 465 aaKnown RBP20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 PRB1P04280 392 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 SRPRAP08240 638 aaKnown RBP20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 PAEPP09466 180 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBXAS1P24557 533 aaPredicted RBP20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 EIF2S3P41091 472 aaKnown RBP20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 PSMD8P48556 350 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 ADPRHP54922 357 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 NXPH1P58417 271 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 KRT85P78386 507 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 SEMG2Q02383 582 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 TARDBPQ13148 414 aaKnown RBP eCLIP20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 MS4A13Q5J8X5 152 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 HES3Q5TGS1 186 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 TMEM270Q6UE05 265 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 CFAP52Q8N1V2 620 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 DQX1Q8TE96 717 aaKnown RBP20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 TSC1Q92574 1164 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 SERAC1Q96JX3 654 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 FAM129BQ96TA1 746 aa20.14■□□□□ 0.81
SMPDL3A-202ENST00000487215 EDDM13A0A1B0GTR0 161 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 M0QYV0 167 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 LUC7L3O95232 432 aaKnown RBP20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 ZIC2O95409 532 aaPredicted RBP20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 FYNP06241 537 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 ARRB1P49407 418 aaPredicted RBP20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 DCAF6Q58WW2 860 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 FBXL19Q6PCT2 694 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 SND1Q7KZF4 910 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 CCDC117Q8IWD4 279 aaPredicted RBP20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 STK40Q8N2I9 435 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 OR14C36Q8NHC7 312 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 SERPINB11Q96P15 392 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 PRORYQ9H606 182 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 SLCO3A1Q9UIG8 710 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 AK5Q9Y6K8 562 aa20.13■□□□□ 0.81
SMPDL3A-202ENST00000487215 TLR4O00206 839 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 GOT1P17174 413 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 C5AR1P21730 350 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 BRD2P25440 801 aaKnown RBP20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 PPP2CBP62714 309 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 PPP2CAP67775 309 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 ECT2LQ008S8 904 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 BNIP3Q12983 259 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 RTP5Q14D33 572 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 CNGA2Q16280 664 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 LRRC69Q6ZNQ3 347 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 SLC35C1Q96A29 364 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 SLC39A13Q96H72 371 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 HSFY1Q96LI6 401 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 NRSN2Q9GZP1 204 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 MIS12Q9H081 205 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 TLR6Q9Y2C9 796 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 CEP83Q9Y592 693 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 PCDHB4Q9Y5E5 795 aa20.12■□□□□ 0.81
SMPDL3A-202ENST00000487215 BPTFQ12830 3046 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 A0A1W2PQ27 194 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 A0A1W2PQ64 194 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 RNF225M0QZC1 329 aaPredicted RBP20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 C1QL1O75973 258 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 FBXO21O94952 628 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 ZNF202O95125 648 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 MOCS3O95396 460 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 MOCS2O96007 188 aaPredicted RBP20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 ADH1BP00325 375 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 CALCAP01258 141 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 PRCPP42785 496 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 RXRGP48443 463 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 FKBP3Q00688 224 aaKnown RBP20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 C19orf57Q0VDD7 668 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 NNTQ13423 1086 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 SLC45A4Q5BKX6 768 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 SFMBT2Q5VUG0 894 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 RNF219Q5W0B1 726 aaPredicted RBP20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 APCDD1Q8J025 514 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 SLC39A7Q92504 469 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 PTPRN2Q92932 1015 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 RPL10LQ96L21 214 aaKnown RBP20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 TSG101Q99816 390 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 ERVMER34-1Q9H9K5 563 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 ARMCX3Q9UH62 379 aaPredicted RBP20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 XPO7Q9UIA9 1087 aaKnown RBP20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 TPX2Q9ULW0 747 aaKnown RBP20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 NAALADL1Q9UQQ1 740 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 RAI2Q9Y5P3 530 aa20.11■□□□□ 0.81
SMPDL3A-202ENST00000487215 ATXN7O15265 892 aaPredicted RBP20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 LATO43561 262 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 IL1BP01584 269 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 MZF1P28698 734 aaPredicted RBP20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 DRD3P35462 400 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 STK19P49842 368 aaPredicted RBP20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 PMS1P54277 932 aaKnown RBP20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 ELAVL3Q14576 367 aaKnown RBP20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 STILQ15468 1287 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 ANKRD40Q6AI12 368 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 NAPEPLDQ6IQ20 393 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 KANSL1Q7Z3B3 1105 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms