RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 FAM131BQ86XD5 332 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 DHRSXQ8N5I4 330 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 OR6P1Q8NGX9 317 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 CERS2Q96G23 380 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 FAR2Q96K12 515 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 COX4I2Q96KJ9 171 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 CCDC106Q9BWC9 280 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 TMEM39BQ9GZU3 492 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 SNX15Q9NRS6 342 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 MAP3K20Q9NYL2 800 aaKnown RBP7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 PLK2Q9NYY3 685 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 SPATA7Q9P0W8 599 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 SIRPGQ9P1W8 387 aa7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 FARP1Q9Y4F1 1045 aaPredicted RBP7.83□□□□□ -1.16
COL6A4P1-202ENST00000487147 TJP1Q07157 1748 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 LSM1O15116 133 aaKnown RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 USP12O75317 370 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 KRT75O95678 551 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 PRDX6P30041 224 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 GRIA3P42263 894 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 GRIA4P48058 902 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TTLL12Q14166 644 aaPredicted RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TAF5Q15542 800 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 CTC1Q2NKJ3 1217 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 AASDHQ4L235 1098 aaPredicted RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 SPANXN3Q5MJ09 141 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 DNAJC14Q6Y2X3 702 aaPredicted RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 KDELC2Q7Z4H8 507 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ERI1Q8IV48 349 aaKnown RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 IGDCC3Q8IVU1 814 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 UBR7Q8N806 425 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ZNF555Q8NEP9 628 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 FNIP1Q8TF40 1166 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ATP6V1E2Q96A05 226 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 NPAS2Q99743 824 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ACE2Q9BYF1 805 aaPredicted RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 CHST12Q9NRB3 414 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 DDX43Q9NXZ2 648 aaKnown RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ZNF70Q9UC06 446 aaPredicted RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TSPAN16Q9UKR8 245 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TEX264Q9Y6I9 313 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 PKD1L3Q7Z443 1732 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TMEM114B3SHH9 223 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 AP3B1O00203 1094 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 RNF103O00237 685 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 SUPT7LO94864 414 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 CST3P01034 146 aaPredicted RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 S100BP04271 92 aaPredicted RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 NR2C2P49116 596 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 PRKAA2P54646 552 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 BFSP2Q13515 415 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 INSCQ1MX18 579 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 DCAF6Q58WW2 860 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 IER5Q5VY09 327 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TATDN1Q6P1N9 297 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 PGAM4Q8N0Y7 254 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TTLL6Q8N841 843 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ZNF781Q8N8C0 355 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 URGCPQ8TCY9 931 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 USP33Q8TEY7 942 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ZNF516Q92618 1163 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ATG4CQ96DT6 458 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 CPXM1Q96SM3 734 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 DDX28Q9NUL7 540 aaKnown RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TMEM216Q9P0N5 145 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 SLC8A2Q9UPR5 921 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 H0Y626 953 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 GOLGA8TH3BQL2 631 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 MATN2O00339 956 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 PHGDHO43175 533 aaKnown RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TBC1D4O60343 1298 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 MGEA5O60502 916 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 DAB1O75553 588 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 TRIM16O95361 564 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 H6PDO95479 791 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 NEK2P51955 445 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 SLC5A3P53794 718 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 DPYSQ14117 519 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 MTX3Q5HYI7 312 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ZPBP2Q6X784 338 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 KCNMB4Q86W47 210 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 ERO1BQ86YB8 467 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 CCDC60Q8IWA6 550 aaPredicted RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 PLD5Q8N7P1 536 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 NCLNQ969V3 563 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 DACH2Q96NX9 599 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 C9orf16Q9BUW7 83 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 SNRNP25Q9BV90 132 aaKnown RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 NOL11Q9H8H0 719 aaKnown RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 LIN28AQ9H9Z2 209 aaKnown RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 KCNK13Q9HB14 408 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 A0A0A0MRY4 1105 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 KCNK1O00180 336 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 PSMD12O00232 456 aaPredicted RBP7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 NR5A2O00482 541 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 INPP4BO15327 924 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 PDGFRBP09619 1106 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 MPSTP25325 297 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 IL1R2P27930 398 aa7.82□□□□□ -1.16
COL6A4P1-202ENST00000487147 THOP1P52888 689 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms