RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MAN2A1Q16706 1144 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 EFHC1Q5JVL4 640 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 CHCHD4Q8N4Q1 142 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 TMEM121BQ9BXQ6 578 aaPredicted RBP25.36■■□□□ 1.65
LIME1-206ENST00000487026 SGK2Q9HBY8 427 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 FBXL12Q9NXK8 326 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 SERGEFQ9UGK8 458 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 NCKAP1Q9Y2A7 1128 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 FNDC3AQ9Y2H6 1198 aaKnown RBP25.36■■□□□ 1.65
LIME1-206ENST00000487026 ZFHX4Q86UP3 3567 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 KNL1Q8NG31 2342 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 FAM170AA1A519 330 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 FAM47DPA6NHR8 397 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 MID1O15344 667 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 RNASEH1O60930 286 aaKnown RBP25.35■■□□□ 1.65
LIME1-206ENST00000487026 GLI1P08151 1106 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 SRPRAP08240 638 aaKnown RBP25.35■■□□□ 1.65
LIME1-206ENST00000487026 ABCB4P21439 1286 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 MZF1P28698 734 aaPredicted RBP25.35■■□□□ 1.65
LIME1-206ENST00000487026 MATKP42679 507 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 STK19P49842 368 aaPredicted RBP25.35■■□□□ 1.65
LIME1-206ENST00000487026 AFF3P51826 1226 aaKnown RBP25.35■■□□□ 1.65
LIME1-206ENST00000487026 DPCR1Q3MIW9 517 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 LAYNQ6UX15 382 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 C11orf57Q6ZUT1 292 aaPredicted RBP25.35■■□□□ 1.65
LIME1-206ENST00000487026 MMAAQ8IVH4 418 aaKnown RBP25.35■■□□□ 1.65
LIME1-206ENST00000487026 CCAR2Q8N163 923 aaKnown RBP25.35■■□□□ 1.65
LIME1-206ENST00000487026 SETD7Q8WTS6 366 aaKnown RBP25.35■■□□□ 1.65
LIME1-206ENST00000487026 NDST4Q9H3R1 872 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 TM9SF3Q9HD45 589 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 ASNSD1Q9NWL6 643 aa25.35■■□□□ 1.65
LIME1-206ENST00000487026 IGF2RP11717 2491 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 HSF2BPO75031 334 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 PRKCSHP14314 528 aaPredicted RBP25.34■■□□□ 1.65
LIME1-206ENST00000487026 PDGFRAP16234 1089 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 CCR1P32246 355 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 NME3Q13232 169 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 HNRNPDQ14103 355 aaKnown RBP25.34■■□□□ 1.65
LIME1-206ENST00000487026 CST6Q15828 149 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 KIF19Q2TAC6 998 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 PTPN20Q4JDL3 420 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 VWA3BQ502W6 1294 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 MIIPQ5JXC2 388 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 RNF219Q5W0B1 726 aaPredicted RBP25.34■■□□□ 1.65
LIME1-206ENST00000487026 DPY19L2P1Q6NXN4 242 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 FBXL22Q6P050 247 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 OLFML1Q6UWY5 402 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 PNPLA1Q8N8W4 532 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 KDM1BQ8NB78 822 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 GATA6Q92908 595 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 IGSF8Q969P0 613 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 NOX5Q96PH1 765 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 FAM129BQ96TA1 746 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 TUBGCP2Q9BSJ2 902 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 TM7SF3Q9NS93 570 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 SNX11Q9Y5W9 270 aa25.34■■□□□ 1.65
LIME1-206ENST00000487026 EDDM13A0A1B0GTR0 161 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 A0A1W2PP55 124 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 TARSL2A2RTX5 802 aaKnown RBP25.33■■□□□ 1.65
LIME1-206ENST00000487026 KCNK3O14649 394 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 CER1O95813 267 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 SLC2A3P11169 496 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 SLC6A3Q01959 620 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 CENPCQ03188 943 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 ARID5BQ14865 1188 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 IL27RAQ6UWB1 636 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 USP30Q70CQ3 517 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 FAM71AQ8IYT1 594 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 STK40Q8N2I9 435 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 NEUROG2Q9H2A3 272 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 SYNCQ9H7C4 482 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 SCML1Q9UN30 329 aa25.33■■□□□ 1.65
LIME1-206ENST00000487026 RNASEH2AO75792 299 aaKnown RBP25.32■■□□□ 1.64
LIME1-206ENST00000487026 IGHV4-34P06331 123 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 VAV1P15498 845 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 CD27P26842 260 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 SLC8A1P32418 973 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 RDXP35241 583 aaKnown RBP25.32■■□□□ 1.64
LIME1-206ENST00000487026 GGCXP38435 758 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 IRAK1P51617 712 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 GALCP54803 685 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 RABGAP1LQ5R372 815 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 FAM114A1Q8IWE2 563 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 PTPRN2Q92932 1015 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 RPRD1AQ96P16 312 aaPredicted RBP25.32■■□□□ 1.64
LIME1-206ENST00000487026 OMDQ99983 421 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 ORAI3Q9BRQ5 295 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 PCOLCE2Q9UKZ9 415 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 ZMIZ1Q9ULJ6 1067 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 ANKRD6Q9Y2G4 727 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 NEUROG3Q9Y4Z2 214 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 ITIH6Q6UXX5 1313 aa25.32■■□□□ 1.64
LIME1-206ENST00000487026 PES1O00541 588 aaKnown RBP25.31■■□□□ 1.64
LIME1-206ENST00000487026 CBFA2T3O75081 653 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 TRIM16O95361 564 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 FTH1P19P0C7X4 201 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 PSMD8P48556 350 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 RNASE9P60153 205 aaKnown RBP25.31■■□□□ 1.64
LIME1-206ENST00000487026 KCNMA1Q12791 1236 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 AUHQ13825 339 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms