RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SRFP11831 508 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 KRT10P13645 584 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 PSMC3P17980 439 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 AMPD1P23109 780 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 GDI1P31150 447 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 CASQ1P31415 396 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 CDKN2BP42772 138 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 IFNAR2P48551 515 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 RPS24P62847 133 aaKnown RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 ALFQ53S48 1182 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 ANKRD20A8PQ5CZ79 823 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 PAPD7Q5XG87 772 aaKnown RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 RHBDF2Q6PJF5 856 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 LRRC31Q6UY01 552 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 SPOCD1Q6ZMY3 1216 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 TPGS1Q6ZTW0 290 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 CIR1Q86X95 450 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 YAF2Q8IY57 180 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 PCDH19Q8TAB3 1148 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 IRF7Q92985 503 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 TMA16Q96EY4 203 aaKnown RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 RPRD1AQ96P16 312 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 CSPG4P5Q96PW8 444 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 DDX50Q9BQ39 737 aaKnown RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 CALN1Q9BXU9 219 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 FOXQ1Q9C009 403 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 EBF3Q9H4W6 596 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 HPS4Q9NQG7 708 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 THG1LQ9NWX6 298 aaKnown RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 MPP6Q9NZW5 540 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 PPARGC1AQ9UBK2 798 aaKnown RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 SNX12Q9UMY4 172 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 MIA3Q5JRA6 1907 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 CTAGE9A4FU28 777 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 OTOL1A6NHN0 477 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-229ENST00000486665 H3BRJ5 948 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 STK25O00506 426 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 ZNF500O60304 480 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-229ENST00000486665 TBL1XO60907 577 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 HOXC13P31276 330 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 CHKAP35790 457 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 HCAR3P49019 387 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 TPI1P60174 286 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 TNK2Q07912 1038 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 ADCY2Q08462 1091 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 DPYSQ14117 519 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 PDGFRLQ15198 375 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 DHCR24Q15392 516 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 LY6G5CQ5SRR4 150 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 ACBD5Q5T8D3 534 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-229ENST00000486665 FYB2Q5VWT5 728 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 RWDD4Q6NW29 188 aaKnown RBP13.16□□□□□ -0.3
HDAC6-229ENST00000486665 RFX8Q6ZV50 586 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 MAP7D3Q8IWC1 876 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 PQLC3Q8N755 202 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 TTC8Q8TAM2 541 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 COG1Q8WTW3 980 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 DEPDC1BQ8WUY9 529 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 BHMTQ93088 406 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 FAF2Q96CS3 445 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 OTUB2Q96DC9 234 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 TBC1D31Q96DN5 1066 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 RNF157Q96PX1 679 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 EPAS1Q99814 870 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 TRMT61BQ9BVS5 477 aaKnown RBP13.16□□□□□ -0.3
HDAC6-229ENST00000486665 HEMGNQ9BXL5 484 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 SPHK2Q9NRA0 654 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 ETNK2Q9NVF9 386 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 PLK2Q9NYY3 685 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 STIM2Q9P246 746 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 CLEC4EQ9ULY5 219 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 MFHAS1Q9Y4C4 1052 aa13.16□□□□□ -0.3
HDAC6-229ENST00000486665 GPR179Q6PRD1 2367 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 hCG_1818297A0A087WSY0 165 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ARNTLO00327 626 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ZNF185O15231 689 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 CHADO15335 359 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 DAPK3O43293 454 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 CYP17A1P05093 508 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ERCC2P18074 760 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 EPHB2P29323 1055 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ARL4AP40617 200 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ID4P47928 161 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 AMPD2Q01433 879 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 MPPE1Q53F39 396 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ODF2Q5BJF6 829 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 RABGAP1LQ5R372 815 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 KAZNQ674X7 775 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 NLRP14Q86W24 1093 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 CCDC50Q8IVM0 306 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 NETO2Q8NC67 525 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 DDI1Q8WTU0 396 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 NXPE3Q969Y0 559 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.3
HDAC6-229ENST00000486665 MS4A14Q96JA4 679 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 PBKQ96KB5 322 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 OSBPL9Q96SU4 736 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ZNF670Q9BS34 389 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 OSBPL8Q9BZF1 889 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms