RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 CSKP41240 450 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 OXCT1P55809 520 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 SLC12A1Q13621 1099 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 PTPRNQ16849 979 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 PLEKHG6Q3KR16 790 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 FNDC3BQ53EP0 1204 aaKnown RBP18.76■□□□□ 0.59
COL1A1-207ENST00000486572 USP39Q53GS9 565 aaKnown RBP18.76■□□□□ 0.59
COL1A1-207ENST00000486572 ZNF683Q8IZ20 524 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 PGBD3Q8N328 593 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 TTC17Q96AE7 1141 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 ZNF653Q96CK0 615 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 DNAJC7Q99615 494 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 CNPY3Q9BT09 278 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 ARHGAP20Q9P2F6 1191 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 CNOT8Q9UFF9 292 aaKnown RBP18.76■□□□□ 0.59
COL1A1-207ENST00000486572 EML5Q05BV3 1969 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 IGLV3-10A0A075B6K4 115 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.75■□□□□ 0.59
COL1A1-207ENST00000486572 E9PAM4 449 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 SYNCRIPO60506 623 aaKnown RBP18.75■□□□□ 0.59
COL1A1-207ENST00000486572 ASLP04424 464 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 EPHX1P07099 455 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 PRKCHP24723 683 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 CDH4P55283 916 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 ZNF177Q13360 481 aaPredicted RBP18.75■□□□□ 0.59
COL1A1-207ENST00000486572 LPAL2Q16609 132 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 CXorf57Q6NSI4 855 aaKnown RBP18.75■□□□□ 0.59
COL1A1-207ENST00000486572 DRC7Q8IY82 874 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 OR8K1Q8NGG5 319 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 NTAN1Q96AB6 310 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 ERLEC1Q96DZ1 483 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 TRIM5Q9C035 493 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 TMEM245Q9H330 911 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 SCINQ9Y6U3 715 aa18.75■□□□□ 0.59
COL1A1-207ENST00000486572 A0A087X0T9 212 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 DRGXA6NNA5 263 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 CNTN5O94779 1100 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 FAM228BP0C875 321 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 NDUFV2P19404 249 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 OGDHQ02218 1023 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 ARID5BQ14865 1188 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 ALFQ53S48 1182 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 LAIR1Q6GTX8 287 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 TMC6Q7Z403 805 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.74■□□□□ 0.59
COL1A1-207ENST00000486572 APCDD1Q8J025 514 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 CCDC185Q8N715 623 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 RUBCNQ92622 972 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 PPP1R9BQ96SB3 815 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 RBSNQ9H1K0 784 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 NCDNQ9UBB6 729 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 TBC1D30Q9Y2I9 924 aa18.74■□□□□ 0.59
COL1A1-207ENST00000486572 DMDP11532 3685 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 TMEM191CA6NGB0 347 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 AP5Z1O43299 807 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 SRGAP2O75044 1071 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 MFAP3LO75121 409 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 HLA-EP13747 358 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 MZF1P28698 734 aaPredicted RBP18.73■□□□□ 0.59
COL1A1-207ENST00000486572 PLK1P53350 603 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 ST8SIA6P61647 398 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 NRG1Q02297 640 aaPredicted RBP18.73■□□□□ 0.59
COL1A1-207ENST00000486572 SCAPQ12770 1279 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 C11orf74Q86VG3 221 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 KDM1BQ8NB78 822 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 SPACA7Q96KW9 195 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 MRGPRX1Q96LB2 322 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 HINFPQ9BQA5 517 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 OSBPL2Q9H1P3 480 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 MRPL47Q9HD33 250 aaKnown RBP18.73■□□□□ 0.59
COL1A1-207ENST00000486572 ABHD10Q9NUJ1 306 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 ZNHIT6Q9NWK9 470 aaKnown RBP18.73■□□□□ 0.59
COL1A1-207ENST00000486572 MYO1AQ9UBC5 1043 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 OR12D3Q9UGF7 316 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 GMEB2Q9UKD1 530 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 GPR179Q6PRD1 2367 aa18.73■□□□□ 0.59
COL1A1-207ENST00000486572 DCLK1O15075 740 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 SRPRAP08240 638 aaKnown RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 PSMA2P25787 234 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 P2RY2P41231 377 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 CTSOP43234 321 aaPredicted RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 AIF1P55008 147 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 ECT2LQ008S8 904 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 SULT2A1Q06520 285 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 CAMK2GQ13555 558 aaPredicted RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 BYSLQ13895 437 aaKnown RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 TSR1Q2NL82 804 aaKnown RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 ARTNQ5T4W7 220 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 MANEALQ5VSG8 457 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 RNF219Q5W0B1 726 aaPredicted RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 SCYL2Q6P3W7 929 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 ALKBH5Q6P6C2 394 aaKnown RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 TFAP2DQ7Z6R9 452 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 SLFN11Q7Z7L1 901 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 SETD3Q86TU7 594 aaPredicted RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 KBTBD6Q86V97 674 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 CNGA4Q8IV77 575 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 FAM160A2Q8N612 972 aaPredicted RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 ZNF366Q8N895 744 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 OR52K2Q8NGK3 314 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms