RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 MID1O15344 667 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 PIAS2O75928 621 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 BEST1O76090 585 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 FAM13AO94988 1023 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 RNF224P0DH78 156 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 SLC5A2P31639 672 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 CHKAP35790 457 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 HARS2P49590 506 aaKnown RBP8.62□□□□□ -1.03
XRN1-212ENST00000486211 GSK3AP49840 483 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 ADPRHP54922 357 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 GUCY1B3Q02153 619 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 ARID5AQ03989 594 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 EHHADHQ08426 723 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 OVGP1Q12889 678 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 ZRSR1Q15695 479 aaKnown RBP8.62□□□□□ -1.03
XRN1-212ENST00000486211 TMEM119Q4V9L6 283 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 DYMQ7RTS9 669 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 TMEM151AQ8N4L1 468 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.62□□□□□ -1.03
XRN1-212ENST00000486211 NECAB1Q8N987 351 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 OR6B3Q8NGW1 331 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 GANCQ8TET4 914 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 ARRDC3Q96B67 414 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 MYO19Q96H55 970 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 SMOQ99835 787 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 SNX25Q9H3E2 840 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 NMUR1Q9HB89 426 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 USP29Q9HBJ7 922 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 INTS13Q9NVM9 706 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
XRN1-212ENST00000486211 NLGN3Q9NZ94 848 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 NUDT5Q9UKK9 219 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 PLA2G4CQ9UP65 541 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 ZNF510Q9Y2H8 683 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 CENPEQ02224 2701 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 OTOGQ6ZRI0 2925 aa8.62□□□□□ -1.03
XRN1-212ENST00000486211 CELSR2Q9HCU4 2923 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 CCDC187A0A096LP49 1063 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 SLC35F4A4IF30 521 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 RTN2O75298 545 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 RNASEH2AO75792 299 aaKnown RBP8.61□□□□□ -1.03
XRN1-212ENST00000486211 FAM163BP0C2L3 166 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 TMEM191BP0C7N4 346 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 HOXD9P28356 352 aaPredicted RBP8.61□□□□□ -1.03
XRN1-212ENST00000486211 CORO1AP31146 461 aaKnown RBP8.61□□□□□ -1.03
XRN1-212ENST00000486211 ABCD1P33897 745 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 TRAPPC10P48553 1259 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 TOB1P50616 345 aaPredicted RBP8.61□□□□□ -1.03
XRN1-212ENST00000486211 KCNA1Q09470 495 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 KCNAB2Q13303 367 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 TRIM29Q14134 588 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 POSTNQ15063 836 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 CST6Q15828 149 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 DIEXFQ68CQ4 756 aaKnown RBP8.61□□□□□ -1.03
XRN1-212ENST00000486211 RBM44Q6ZP01 1051 aaKnown RBP8.61□□□□□ -1.03
XRN1-212ENST00000486211 CHST9Q7L1S5 443 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 GPRIN1Q7Z2K8 1008 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 C14orf80Q86SX3 495 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 VASH2Q86V25 355 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 GPBP1Q86WP2 473 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 FAM217AQ8IXS0 508 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 FUKQ8N0W3 1084 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 CPXM2Q8N436 756 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 AADATQ8N5Z0 425 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 WFIKKN2Q8TEU8 576 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 STRA6Q9BX79 667 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 FOXP1Q9H334 677 aaPredicted RBP8.61□□□□□ -1.03
XRN1-212ENST00000486211 FBXO44Q9H4M3 255 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 TMPRSS4Q9NRS4 437 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 AGO1Q9UL18 857 aaKnown RBP8.61□□□□□ -1.03
XRN1-212ENST00000486211 TPX2Q9ULW0 747 aaKnown RBP8.61□□□□□ -1.03
XRN1-212ENST00000486211 SCML2Q9UQR0 700 aa8.61□□□□□ -1.03
XRN1-212ENST00000486211 A0A1W2PQH9 124 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 GOLGA8IPA6NC78 632 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 VWA3AA6NCI4 1184 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 GOLGA8JA6NMD2 632 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 K7ESM1 405 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 RNF225M0QZC1 329 aaPredicted RBP8.6□□□□□ -1.03
XRN1-212ENST00000486211 MAGEC1O60732 1142 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 SIN3BO75182 1162 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 TCEA3O75764 348 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 CYBBP04839 570 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 DLDP09622 509 aaKnown RBP8.6□□□□□ -1.03
XRN1-212ENST00000486211 LIPCP11150 499 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 RARGP13631 454 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 DCTP40126 519 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 PRPHP41219 470 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 HS1BP3Q53T59 392 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 C10orf120Q5SQS8 335 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 GUSBP11Q6P575 273 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 VWA5B2Q8N398 1253 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 DDI1Q8WTU0 396 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 GTF3C6Q969F1 213 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 SMARCD1Q96GM5 515 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 ANKRD36BP1Q96IX9 119 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 CSNK1G1Q9HCP0 422 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 KRT82Q9NSB4 513 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 ABCB8Q9NUT2 735 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 KLHL11Q9NVR0 708 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 SUN2Q9UH99 717 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms