RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 WASP42768 502 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 CXCR3P49682 368 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 COPAP53621 1224 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 POLR2FP61218 127 aaKnown RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 RPS24P62847 133 aaKnown RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 NOMO3P69849 1222 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 CDR2Q01850 454 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 ARID5AQ03989 594 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 TYRO3Q06418 890 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 SULT2A1Q06520 285 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 PTPRNQ16849 979 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 DUOXA1Q1HG43 343 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 RABGAP1LQ5R372 815 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 TRIM72Q6ZMU5 477 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 FAM183BPQ6ZVS7 135 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 DGLUCYQ7Z3D6 616 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 NOP9Q86U38 636 aaKnown RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 XYLT1Q86Y38 959 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 TMPRSS6Q8IU80 811 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 MFN1Q8IWA4 741 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 CCDC117Q8IWD4 279 aaPredicted RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 OR2T3Q8NH03 318 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 RLN3Q8WXF3 142 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 DNASE2BQ8WZ79 361 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 BHMTQ93088 406 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 SIPA1Q96FS4 1042 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 MYO19Q96H55 970 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 SPAG5Q96R06 1193 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 HAPLN3Q96S86 360 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 NUP58Q9BVL2 599 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 CIPCQ9C0C6 399 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 MKRN2Q9H000 416 aaKnown RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 NUCKS1Q9H1E3 243 aaKnown RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 PDCL3Q9H2J4 239 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 WDCPQ9H6R7 721 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 ZDHHC4Q9NPG8 344 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 RTN4Q9NQC3 1192 aaKnown RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 TAB2Q9NYJ8 693 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 CALCOCO1Q9P1Z2 691 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 NOCTQ9UK39 431 aaKnown RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 CDV3Q9UKY7 258 aaKnown RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 INTS6Q9UL03 887 aaKnown RBP7.24□□□□□ -1.25
VPS50-218ENST00000485994 STAP1Q9ULZ2 295 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 TBC1D30Q9Y2I9 924 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 CHD5Q8TDI0 1954 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 ITIH6Q6UXX5 1313 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 NCOR2Q9Y618 2525 aa7.24□□□□□ -1.25
VPS50-218ENST00000485994 IGLV3-10A0A075B6K4 115 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 A0A1B0GVM2 712 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 TCAF2A6NFQ2 919 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 METTL12A8MUP2 240 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 UPK3BL1B0FP48 263 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 C10orf142B7Z368 130 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 UPK3BL2E5RIL1 263 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 F5H5T6 163 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 H0Y626 953 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 CDX4O14627 284 aaPredicted RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 CLDN11O75508 207 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 WFS1O76024 890 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 LUC7L3O95232 432 aaKnown RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 EPHX1P07099 455 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 MMEP08473 750 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 SERPINF2P08697 491 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 CCDC172P0C7W6 258 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 PNMA6AP0CW24 399 aaPredicted RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 CHRNB2P17787 502 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 PTMSP20962 102 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 CD6P30203 668 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 CD70P32970 193 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 DHPSP49366 369 aaPredicted RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 TPMTP51580 245 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 SGSHP51688 502 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 CDH4P55283 916 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 PITX1P78337 314 aaPredicted RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 FMO1Q01740 532 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 CREB5Q02930 508 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 UBXN1Q04323 297 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 ZNF33AQ06730 810 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 SFSWAPQ12872 951 aaKnown RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 LMAN2Q12907 356 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 PTP4A2Q12974 167 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 SF3A2Q15428 464 aaKnown RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 SYCP1Q15431 976 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 KLHL40Q2TBA0 621 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 HNRNPA1L2Q32P51 320 aaKnown RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 PLEKHG6Q3KR16 790 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 FSCBQ5H9T9 825 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 ARTNQ5T4W7 220 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 STPG1Q5TH74 334 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 LYSMD4Q5XG99 296 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 PPP1R2P3Q6NXS1 205 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 FBXL22Q6P050 247 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 SERPINA13PQ6UXR4 307 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 USP30Q70CQ3 517 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 CYP2U1Q7Z449 544 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 PASD1Q8IV76 773 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 TMEFF1Q8IYR6 380 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 LGI2Q8N0V4 545 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms