RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 DYNLT1P63172 113 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 OTUD4Q01804 1114 aaKnown RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 SLC10A2Q12908 348 aaPredicted RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 CBX2Q14781 532 aaPredicted RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 CASP8Q14790 479 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 OASLQ15646 514 aaKnown RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 ZNF77Q15935 545 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 ALFQ53S48 1182 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 ODF2Q5BJF6 829 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 DRICH1Q6PGQ1 229 aaPredicted RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 NPNTQ6UXI9 565 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 HTR3DQ70Z44 454 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 MAATS1Q7Z4T9 603 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 DENND1CQ8IV53 801 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 NPWQ8N729 165 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 GOLGA6L1Q8N7Z2 621 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 C1orf54Q8WWF1 131 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 ATG4AQ8WYN0 398 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 NKD2Q969F2 451 aaPredicted RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 TBC1D31Q96DN5 1066 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 PABPC5Q96DU9 382 aaKnown RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 P2RY11Q96G91 374 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 OLFM3Q96PB7 478 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 LRRC1Q9BTT6 524 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 DDX47Q9H0S4 455 aaKnown RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 SMG9Q9H0W8 520 aaKnown RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 SAE1Q9UBE0 346 aaPredicted RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 SLC12A6Q9UHW9 1150 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 VANGL2Q9ULK5 521 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 REV3LO60673 3130 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 E2F8A0AVK6 867 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 BHMG1C9JSJ3 638 aaPredicted RBP11.65□□□□□ -0.54
SND1-212ENST00000485871 FGF10O15520 208 aaPredicted RBP11.65□□□□□ -0.54
SND1-212ENST00000485871 LIASO43766 372 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 MFSD11O43934 449 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 ZFXP17010 805 aaPredicted RBP11.65□□□□□ -0.54
SND1-212ENST00000485871 FSHRP23945 695 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 EPHB2P29323 1055 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 PTGIRP43119 386 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 SLC11A2P49281 568 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 SGSHP51688 502 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 GBE1Q04446 702 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 CUL1Q13616 776 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 ADGRF1Q5T601 910 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 AFMIDQ63HM1 303 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 RFWD3Q6PCD5 774 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 CHSY1Q86X52 802 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 DDX42Q86XP3 938 aaKnown RBP eCLIP11.65□□□□□ -0.54
SND1-212ENST00000485871 TP53INP2Q8IXH6 220 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 CPXM2Q8N436 756 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 SH3RF2Q8TEC5 729 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 AENQ8WTP8 325 aaKnown RBP11.65□□□□□ -0.54
SND1-212ENST00000485871 FGF13Q92913 245 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 SLCO2A1Q92959 643 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 CAVIN3Q969G5 261 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 HAUS1Q96CS2 278 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 RSPRY1Q96DX4 576 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 FAM118BQ9BPY3 351 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 NOL6Q9H6R4 1146 aaKnown RBP11.65□□□□□ -0.54
SND1-212ENST00000485871 GDF3Q9NR23 364 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 TDP1Q9NUW8 608 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 NDFIP2Q9NV92 336 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 TMEM248Q9NWD8 314 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 CLDND1Q9NY35 253 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 DTLQ9NZJ0 730 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 CFAP97Q9P2B7 532 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 PCYOX1Q9UHG3 505 aa11.65□□□□□ -0.54
SND1-212ENST00000485871 SASH3O75995 380 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 CNTN5O94779 1100 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 ALADP13716 330 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 RHOQP17081 205 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 FCARP24071 287 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 CHRNA3P32297 505 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 AVPR1AP37288 418 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 COILP38432 576 aaPredicted RBP11.64□□□□□ -0.55
SND1-212ENST00000485871 TNNT3P45378 269 aaPredicted RBP11.64□□□□□ -0.55
SND1-212ENST00000485871 KCNJ1P48048 391 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 NR2C2P49116 596 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 FNTAP49354 379 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 NHLH1Q02575 133 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 RNF43Q68DV7 783 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 C1orf228Q6PIY5 440 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 ARID3BQ8IVW6 561 aaPredicted RBP11.64□□□□□ -0.55
SND1-212ENST00000485871 ARHGAP12Q8IWW6 846 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 BBS7Q8IWZ6 715 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 KLHL7Q8IXQ5 586 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 LGI2Q8N0V4 545 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 KIAA1958Q8N8K9 716 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 RTL3Q8N8U3 475 aaKnown RBP11.64□□□□□ -0.55
SND1-212ENST00000485871 SMRP1Q8NCR6 262 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 ZSCAN18Q8TBC5 510 aaPredicted RBP11.64□□□□□ -0.55
SND1-212ENST00000485871 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.64□□□□□ -0.55
SND1-212ENST00000485871 SUSD6Q92537 303 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 MAGOHBQ96A72 148 aaKnown RBP11.64□□□□□ -0.55
SND1-212ENST00000485871 ASB16Q96NS5 453 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 LRRC3BQ96PB8 259 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 KRT12Q99456 494 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 MAK16Q9BXY0 300 aaKnown RBP11.64□□□□□ -0.55
SND1-212ENST00000485871 FRMD8P1Q9BZ68 369 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms