RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 AP5Z1O43299 807 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 LRP3O75074 770 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 EPN2O95208 641 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 FTLP02792 175 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-205ENST00000485746 RHOCP08134 193 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 SRPRAP08240 638 aaKnown RBP12.89□□□□□ -0.35
PTCD1-205ENST00000485746 TPM1P09493 284 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 RFC1P35251 1148 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-205ENST00000485746 PTPN9P43378 593 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 GSCP56915 257 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-205ENST00000485746 ZBED6P86452 979 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 RPL6Q02878 288 aaKnown RBP12.89□□□□□ -0.35
PTCD1-205ENST00000485746 SULT2A1Q06520 285 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 CCDC6Q16204 474 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
PTCD1-205ENST00000485746 MAP7D1Q3KQU3 841 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 PLEKHG6Q3KR16 790 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 SH3PXD2AQ5TCZ1 1133 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 PMS2CLQ68D20 193 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 RNF43Q68DV7 783 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 TRNP1Q6NT89 227 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 WDR59Q6PJI9 974 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 ARMCX6Q7L4S7 300 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 STRADAQ7RTN6 431 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 ZNF571Q7Z3V5 609 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-205ENST00000485746 CYP2U1Q7Z449 544 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 CACUL1Q86Y37 369 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 TMEFF1Q8IYR6 380 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 APCDD1Q8J025 514 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 DEFB119Q8N690 84 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 OR2T3Q8NH03 318 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 GANCQ8TET4 914 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 VCPIP1Q96JH7 1222 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 MRGPRX1Q96LB2 322 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 C1orf74Q96LT6 269 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 ADAM33Q9BZ11 813 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 XPO4Q9C0E2 1151 aaKnown RBP12.89□□□□□ -0.35
PTCD1-205ENST00000485746 TTYH3Q9C0H2 523 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 TMPRSS4Q9NRS4 437 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 SEMA4GQ9NTN9 838 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 PARVAQ9NVD7 372 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 TAS2R14Q9NYV8 317 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 SLC25A13Q9UJS0 675 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 VPS28Q9UK41 221 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 CAPN11Q9UMQ6 739 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 PCDHGA5Q9Y5G8 931 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 RNASEH1O60930 286 aaKnown RBP12.88□□□□□ -0.35
PTCD1-205ENST00000485746 RTN2O75298 545 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 ENDOD1O94919 500 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 RRM1P23921 792 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 MZF1P28698 734 aaPredicted RBP12.88□□□□□ -0.35
PTCD1-205ENST00000485746 ADRA1BP35368 520 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 MPLP40238 635 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 PRKCIP41743 596 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 CTSOP43234 321 aaPredicted RBP12.88□□□□□ -0.35
PTCD1-205ENST00000485746 KRT83P78385 493 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 ENPP2Q13822 863 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 PTPRNQ16849 979 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 ACCSLQ4AC99 568 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 AASDHQ4L235 1098 aaPredicted RBP12.88□□□□□ -0.35
PTCD1-205ENST00000485746 RWDD4Q6NW29 188 aaKnown RBP12.88□□□□□ -0.35
PTCD1-205ENST00000485746 TFAP2DQ7Z6R9 452 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 FRMD1Q8N878 549 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 PIGKQ92643 395 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 SYN2Q92777 582 aaPredicted RBP12.88□□□□□ -0.35
PTCD1-205ENST00000485746 TRIM11Q96F44 468 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 LMLNQ96KR4 655 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 RPL10LQ96L21 214 aaKnown RBP12.88□□□□□ -0.35
PTCD1-205ENST00000485746 TMEM245Q9H330 911 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 FBRSQ9HAH7 460 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 ANLNQ9NQW6 1124 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 MPP6Q9NZW5 540 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 MYO1AQ9UBC5 1043 aa12.88□□□□□ -0.35
PTCD1-205ENST00000485746 MBD1Q9UIS9 605 aaPredicted RBP12.88□□□□□ -0.35
PTCD1-205ENST00000485746 INTS6Q9UL03 887 aaKnown RBP12.88□□□□□ -0.35
PTCD1-205ENST00000485746 IGHV1OR15-9A0A0B4J2B8 117 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 DDX3XO00571 662 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTCD1-205ENST00000485746 FOXD2O60548 495 aaPredicted RBP12.87□□□□□ -0.35
PTCD1-205ENST00000485746 CNTN5O94779 1100 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 DNTTP04053 509 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 SERPING1P05155 500 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 GZMAP12544 262 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 PSMA2P25787 234 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 CD6P30203 668 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 OXTRP30559 389 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 OR1E1P30953 314 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 PBX1P40424 430 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 IRAK1P51617 712 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 ZNF143P52747 638 aaPredicted RBP12.87□□□□□ -0.35
PTCD1-205ENST00000485746 RPL7AP62424 266 aaKnown RBP12.87□□□□□ -0.35
PTCD1-205ENST00000485746 LMNB2Q03252 620 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 CAMK2GQ13555 558 aaPredicted RBP12.87□□□□□ -0.35
PTCD1-205ENST00000485746 CSRP2Q16527 193 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 C6orf118Q5T5N4 469 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 SLFN11Q7Z7L1 901 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 ZNF653Q96CK0 615 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 ZYG11BQ9C0D3 744 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 MKRN2Q9H000 416 aaKnown RBP12.87□□□□□ -0.35
PTCD1-205ENST00000485746 PARD6AQ9NPB6 346 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 PRSS16Q9NQE7 514 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms