RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 F5H5T6 163 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 GLI1P08151 1106 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 SLC2A3P11169 496 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 ABCB4P21439 1286 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 CTSOP43234 321 aaPredicted RBP17.72■□□□□ 0.43
SMC4-216ENST00000485645 GRIA4P48058 902 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 PITX1P78337 314 aaPredicted RBP17.72■□□□□ 0.43
SMC4-216ENST00000485645 CDK17Q00537 523 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 ECT2LQ008S8 904 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 EIF4EBP2Q13542 120 aaPredicted RBP17.72■□□□□ 0.43
SMC4-216ENST00000485645 SUZ12Q15022 739 aaKnown RBP17.72■□□□□ 0.43
SMC4-216ENST00000485645 CST6Q15828 149 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 KIF19Q2TAC6 998 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 C9orf64Q5T6V5 341 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 APCDD1Q8J025 514 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 ADAMTS14Q8WXS8 1223 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 ZCCHC14Q8WYQ9 949 aaKnown RBP17.72■□□□□ 0.43
SMC4-216ENST00000485645 PPP1R13BQ96KQ4 1090 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 FAM204AQ9H8W3 233 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 APOBEC2Q9Y235 224 aaKnown RBP17.72■□□□□ 0.43
SMC4-216ENST00000485645 ANKRD6Q9Y2G4 727 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 SYNJ2BP-COX16A0A087WUM0 186 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 GTPBP10A4D1E9 387 aaKnown RBP17.71■□□□□ 0.43
SMC4-216ENST00000485645 FAM47DPA6NHR8 397 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 MID1O15344 667 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 FLRT2O43155 660 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 PON1P27169 355 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 NNMTP40261 264 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 MTIF2P46199 727 aaKnown RBP17.71■□□□□ 0.43
SMC4-216ENST00000485645 APBA1Q02410 837 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 PTK2Q05397 1052 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 SLC12A1Q13621 1099 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 TPD52L1Q16890 204 aaPredicted RBP17.71■□□□□ 0.43
SMC4-216ENST00000485645 EFHC1Q5JVL4 640 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 KIAA0895LQ68EN5 471 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 DBX2Q6ZNG2 339 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 ADAT2Q7Z6V5 191 aaKnown RBP17.71■□□□□ 0.43
SMC4-216ENST00000485645 GLRX5Q86SX6 157 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 PASD1Q8IV76 773 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 MMAAQ8IVH4 418 aaKnown RBP17.71■□□□□ 0.43
SMC4-216ENST00000485645 DEFB106AQ8N104 65 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 WDTC1Q8N5D0 677 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 PNPLA1Q8N8W4 532 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 SHC3Q92529 594 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 RNF34Q969K3 372 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 RPL10LQ96L21 214 aaKnown RBP17.71■□□□□ 0.43
SMC4-216ENST00000485645 NOX5Q96PH1 765 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 SLC2A13Q96QE2 648 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 CPXM1Q96SM3 734 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 OMDQ99983 421 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 ASNSD1Q9NWL6 643 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 DDIT4Q9NX09 232 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 COX16Q9P0S2 106 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 SLCO3A1Q9UIG8 710 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 PCDHGC3Q9UN70 934 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 SNX11Q9Y5W9 270 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 CHD6Q8TD26 2715 aa17.71■□□□□ 0.43
SMC4-216ENST00000485645 ITIH6Q6UXX5 1313 aa17.71■□□□□ 0.42
SMC4-216ENST00000485645 A0A1W2PP55 124 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 LRRC72A6NJI9 287 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 HSF2BPO75031 334 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 RNASEH2AO75792 299 aaKnown RBP17.7■□□□□ 0.42
SMC4-216ENST00000485645 CCR1P32246 355 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 GALCP54803 685 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 SNX16P57768 344 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 RABGAP1LQ5R372 815 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 TTC39BQ5VTQ0 682 aaPredicted RBP17.7■□□□□ 0.42
SMC4-216ENST00000485645 SMYD5Q6GMV2 418 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 IRF2BP1Q8IU81 584 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 CCAR2Q8N163 923 aaKnown RBP17.7■□□□□ 0.42
SMC4-216ENST00000485645 MLKLQ8NB16 471 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 RHBDD1Q8TEB9 315 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 PRMT1Q99873 361 aaKnown RBP17.7■□□□□ 0.42
SMC4-216ENST00000485645 NEUROG2Q9H2A3 272 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 SERGEFQ9UGK8 458 aa17.7■□□□□ 0.42
SMC4-216ENST00000485645 A0A1B0GVM2 712 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 TCAF2A6NFQ2 919 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 GRAP2O75791 330 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 IGHV4-34P06331 123 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 PDGFRAP16234 1089 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 SLC8A1P32418 973 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 KRT9P35527 623 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 OXCT1P55809 520 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 RACK1P63244 317 aaKnown RBP17.69■□□□□ 0.42
SMC4-216ENST00000485645 SULT2A1Q06520 285 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 MTA1Q13330 715 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 OR6B2Q6IFH4 312 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 NCEH1Q6PIU2 408 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 LAYNQ6UX15 382 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 C11orf57Q6ZUT1 292 aaPredicted RBP17.69■□□□□ 0.42
SMC4-216ENST00000485645 SLCO6A1Q86UG4 719 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 CIR1Q86X95 450 aaPredicted RBP17.69■□□□□ 0.42
SMC4-216ENST00000485645 PTPRN2Q92932 1015 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 IGSF8Q969P0 613 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 FAM129BQ96TA1 746 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 CDC6Q99741 560 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 ORAI3Q9BRQ5 295 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 CHMP5Q9NZZ3 219 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 ADAMTS1Q9UHI8 967 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 DNAJC12Q9UKB3 198 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms