RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 PSTPIP1O43586 416 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 RHOQP17081 205 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 EPHB2P29323 1055 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 HCAR3P49019 387 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 ZNF177Q13360 481 aaPredicted RBP20.5■□□□□ 0.87
COL6A2-208ENST00000485591 CCINQ13939 588 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 PPP6R3Q5H9R7 873 aaPredicted RBP20.5■□□□□ 0.87
COL6A2-208ENST00000485591 CXorf57Q6NSI4 855 aaKnown RBP20.5■□□□□ 0.87
COL6A2-208ENST00000485591 RWDD4Q6NW29 188 aaKnown RBP20.5■□□□□ 0.87
COL6A2-208ENST00000485591 NUDT18Q6ZVK8 323 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 BMP8AQ7Z5Y6 402 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 ANKS1BQ7Z6G8 1248 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 KIAA0907Q7Z7F0 614 aaPredicted RBP20.5■□□□□ 0.87
COL6A2-208ENST00000485591 NLRP14Q86W24 1093 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 CCDC105Q8IYK2 499 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 FLCNQ8NFG4 579 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 KIAA1524Q8TCG1 905 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 EZH1Q92800 747 aaPredicted RBP20.5■□□□□ 0.87
COL6A2-208ENST00000485591 LMLNQ96KR4 655 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 PCDH18Q9HCL0 1135 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 TMEM248Q9NWD8 314 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 GGA2Q9UJY4 613 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 GUCA1BQ9UMX6 200 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 TBC1D30Q9Y2I9 924 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 MTF2Q9Y483 593 aaPredicted RBP20.5■□□□□ 0.87
COL6A2-208ENST00000485591 CAPN6Q9Y6Q1 641 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 MUC3AQ02505 3323 aa20.5■□□□□ 0.87
COL6A2-208ENST00000485591 MUC22E2RYF6 1773 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-208ENST00000485591 FAM170BA6NMN3 283 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 H3BRJ5 948 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 FGF10O15520 208 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-208ENST00000485591 EGFP01133 1207 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 CHRNB1P11230 501 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 PABPC1P11940 636 aaKnown RBP20.49■□□□□ 0.87
COL6A2-208ENST00000485591 GOT1P17174 413 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 CD70P32970 193 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 ARSEP51690 589 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 OXCT1P55809 520 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 LMAN2Q12907 356 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 LRRC32Q14392 662 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 GEN1Q17RS7 908 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 FBXO43Q4G163 708 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 ATP13A4Q4VNC1 1196 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 FSCBQ5H9T9 825 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 DGKKQ5KSL6 1271 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 RFX8Q6ZV50 586 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 TFAP2DQ7Z6R9 452 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 SETD3Q86TU7 594 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-208ENST00000485591 SYCE1Q8N0S2 351 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 WFIKKN2Q8TEU8 576 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 CATSPERBQ9H7T0 1116 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 LZTFL1Q9NQ48 299 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 ABCB8Q9NUT2 735 aa20.49■□□□□ 0.87
COL6A2-208ENST00000485591 KIAA1522Q9P206 1035 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-208ENST00000485591 RCOR3Q9P2K3 495 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-208ENST00000485591 WASH4PA8MWX3 477 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 STK25O00506 426 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 NCAM2O15394 837 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 ZSCAN12O43309 604 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 PALMO75781 387 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 ARL4AP40617 200 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 TNFRSF4P43489 277 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 MAPKAPK2P49137 400 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 CDH6P55285 790 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 FZD5Q13467 585 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 SLC12A1Q13621 1099 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 KRT81Q14533 505 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 EIF4HQ15056 248 aaKnown RBP20.48■□□□□ 0.87
COL6A2-208ENST00000485591 PDK2Q15119 407 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 C6orf118Q5T5N4 469 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 AHI1Q8N157 1196 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 RTL3Q8N8U3 475 aaKnown RBP20.48■□□□□ 0.87
COL6A2-208ENST00000485591 TSC1Q92574 1164 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 KLHL11Q9NVR0 708 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 DDX56Q9NY93 547 aaKnown RBP20.48■□□□□ 0.87
COL6A2-208ENST00000485591 CWC15Q9P013 229 aaKnown RBP20.48■□□□□ 0.87
COL6A2-208ENST00000485591 SIT1Q9Y3P8 196 aa20.48■□□□□ 0.87
COL6A2-208ENST00000485591 TBC1D3BA6NDS4 549 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 PRRT4C9JH25 899 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 K7EQS6 105 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 RHOCP08134 193 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 AOC1P19801 751 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 OR1E1P30953 314 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 DPYSL3Q14195 570 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 DMC1Q14565 340 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 SFTPA1Q8IWL2 248 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 SYNPOQ8N3V7 929 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 OR52K2Q8NGK3 314 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 PBXIP1Q96AQ6 731 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 CLDN23Q96B33 292 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 ZNF670Q9BS34 389 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 C11orf16Q9NQ32 467 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 STARD13Q9Y3M8 1113 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 KMT2EQ8IZD2 1858 aa20.47■□□□□ 0.87
COL6A2-208ENST00000485591 CD48P09326 243 aa20.46■□□□□ 0.87
COL6A2-208ENST00000485591 TNNT1P13805 278 aa20.46■□□□□ 0.87
COL6A2-208ENST00000485591 CTNNA1P35221 906 aaKnown RBP20.46■□□□□ 0.87
COL6A2-208ENST00000485591 CSKP41240 450 aa20.46■□□□□ 0.87
COL6A2-208ENST00000485591 CLCN5P51795 746 aa20.46■□□□□ 0.87
COL6A2-208ENST00000485591 PLK1P53350 603 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms