RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.48□□□□□ -1.53
CCDC66-219ENST00000484441 HERC5Q9UII4 1024 aaKnown RBP5.48□□□□□ -1.53
CCDC66-219ENST00000484441 DAPP1Q9UN19 280 aa5.48□□□□□ -1.53
CCDC66-219ENST00000484441 SQORQ9Y6N5 450 aa5.48□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3DA0A087WVF3 549 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3IA0A087WXS9 549 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3EA0A087X179 549 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3KA0A087X1G2 549 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 DPPA5A6NC42 116 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3BA6NDS4 549 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3FA6NER0 549 aaPredicted RBP5.47□□□□□ -1.53
CCDC66-219ENST00000484441 EFCAB8A8MWE9 144 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 FOXO6A8MYZ6 492 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3LB9A6J9 549 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 RHODO00212 210 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 ACKR2O00590 384 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 SPTLC2O15270 562 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 NEURL1O76050 574 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 CRYABP02511 175 aaKnown RBP5.47□□□□□ -1.53
CCDC66-219ENST00000484441 HMGB1P09429 215 aaKnown RBP5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3HP0C7X1 549 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 GYS1P13807 737 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 ICA1Q05084 483 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBRG1Q3YBR2 411 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 ZNF569Q5MCW4 686 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TTC39AQ5SRH9 613 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 ATPAF1Q5TC12 328 aaPredicted RBP5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3GQ6DHY5 549 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TANGO2Q6ICL3 276 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3CQ6IPX1 549 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 ERAP2Q6P179 960 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 RAB11FIP2Q7L804 512 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 TBC1D3Q8IZP1 549 aaPredicted RBP5.47□□□□□ -1.53
CCDC66-219ENST00000484441 SAMD3Q8N6K7 520 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 STT3BQ8TCJ2 826 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 HMGB4Q8WW32 186 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 RMDN3Q96TC7 470 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 PABPC3Q9H361 631 aaKnown RBP5.47□□□□□ -1.53
CCDC66-219ENST00000484441 FZD3Q9NPG1 666 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 C19orf53Q9UNZ5 99 aaPredicted RBP5.47□□□□□ -1.53
CCDC66-219ENST00000484441 SLC8A2Q9UPR5 921 aa5.47□□□□□ -1.53
CCDC66-219ENST00000484441 ACTL6BO94805 426 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 HEXIM1O94992 359 aaKnown RBP5.46□□□□□ -1.54
CCDC66-219ENST00000484441 IFNA2P01563 188 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 HOXB2P14652 356 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 POLD2P49005 469 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 THBS3P49746 956 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 FOXO1Q12778 655 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 SEMA3AQ14563 771 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 ODF3L2Q3SX64 289 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 C10orf76Q5T2E6 689 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 TRAPPC11Q7Z392 1133 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 KDELC2Q7Z4H8 507 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 SPICE1Q8N0Z3 855 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 SORBS1Q9BX66 1292 aaKnown RBP5.46□□□□□ -1.54
CCDC66-219ENST00000484441 TMEM120AQ9BXJ8 343 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 PLCB1Q9NQ66 1216 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 SLC22A11Q9NSA0 550 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 DTX4Q9Y2E6 619 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 PKP3Q9Y446 797 aa5.46□□□□□ -1.54
CCDC66-219ENST00000484441 FAM90A8PA6NJQ4 464 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 MDM4O15151 490 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 LCKP06239 509 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 FAM90A13PP0C7W8 464 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 FAM90A24PP0C7X0 464 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 SNHG28P0DPA3 235 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 CHRNB1P11230 501 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 RCAN1P53805 252 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 NANOS2P60321 138 aaKnown RBP5.45□□□□□ -1.54
CCDC66-219ENST00000484441 AP2B1P63010 937 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 RHAGQ02094 409 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 MORC3Q14149 939 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 PRTGQ2VWP7 1150 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 DAB2IPQ5VWQ8 1189 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 NUGGCQ68CJ6 796 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 CYB5R4Q7L1T6 521 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 CACNA2D3Q8IZS8 1091 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 ENDOVQ8N8Q3 282 aaKnown RBP5.45□□□□□ -1.54
CCDC66-219ENST00000484441 SCAMP5Q8TAC9 235 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 MARK4Q96L34 752 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 ADAD1Q96M93 576 aaKnown RBP5.45□□□□□ -1.54
CCDC66-219ENST00000484441 DDX23Q9BUQ8 820 aaKnown RBP5.45□□□□□ -1.54
CCDC66-219ENST00000484441 KRTAP1-5Q9BYS1 174 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 ABHD16BQ9H3Z7 469 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 TASP1Q9H6P5 420 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 AAMDCQ9H7C9 122 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 TNFSF13BQ9Y275 285 aa5.45□□□□□ -1.54
CCDC66-219ENST00000484441 CXorf65A6NEN9 183 aa5.44□□□□□ -1.54
CCDC66-219ENST00000484441 ZC3H11AO75152 810 aaKnown RBP eCLIP5.44□□□□□ -1.54
CCDC66-219ENST00000484441 NFATC1O95644 943 aa5.44□□□□□ -1.54
CCDC66-219ENST00000484441 CSTBP04080 98 aaKnown RBP5.44□□□□□ -1.54
CCDC66-219ENST00000484441 CIITAP33076 1130 aa5.44□□□□□ -1.54
CCDC66-219ENST00000484441 HTR6P50406 440 aa5.44□□□□□ -1.54
CCDC66-219ENST00000484441 GALNTL6Q49A17 601 aa5.44□□□□□ -1.54
CCDC66-219ENST00000484441 GGT6Q6P531 493 aa5.44□□□□□ -1.54
CCDC66-219ENST00000484441 RINLQ6ZS11 566 aa5.44□□□□□ -1.54
CCDC66-219ENST00000484441 ATG16L2Q8NAA4 619 aa5.44□□□□□ -1.54
CCDC66-219ENST00000484441 IP6K1Q92551 441 aa5.44□□□□□ -1.54
CCDC66-219ENST00000484441 CENPIQ92674 756 aaPredicted RBP5.44□□□□□ -1.54
CCDC66-219ENST00000484441 FRMD8Q9BZ67 464 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms