RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 PRDM16Q9HAZ2 1276 aa6.62□□□□□ -1.35
NCL-209ENST00000484328 PACSIN2Q9UNF0 486 aaPredicted RBP6.62□□□□□ -1.35
NCL-209ENST00000484328 EFR3BQ9Y2G0 817 aa6.62□□□□□ -1.35
NCL-209ENST00000484328 TBC1D30Q9Y2I9 924 aa6.62□□□□□ -1.35
NCL-209ENST00000484328 SLC27A6Q9Y2P4 619 aa6.62□□□□□ -1.35
NCL-209ENST00000484328 VCANP13611 3396 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 MYO10Q9HD67 2058 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 CXorf51AA0A1B0GTR3 108 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 TYW5A2RUC4 315 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 PI4K2BG5E9Z4 385 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 CES2O00748 559 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 TRDMT1O14717 391 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 CREB3O43889 395 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 TSPAN3O60637 253 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 TBL1XO60907 577 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 SRGAP2O75044 1071 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 TULP3O75386 442 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 ZRANB2O95218 330 aaKnown RBP eCLIP6.61□□□□□ -1.35
NCL-209ENST00000484328 ATP1A1P05023 1023 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 CISD3P0C7P0 127 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 PYGMP11217 842 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 TYRP14679 529 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 ERCC2P18074 760 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 HLA-FP30511 346 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 CTHP32929 405 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 DEKP35659 375 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 GJC1P36383 396 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 SSR1P43307 286 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 PLK1P53350 603 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 GNG11P61952 73 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 ETF1P62495 437 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 MESP2Q0VG99 397 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 KLF1Q13351 362 aaPredicted RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 KRT81Q14533 505 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 PAFAH1B3Q15102 231 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 RPS6KA1Q15418 735 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 ANKRD20A8PQ5CZ79 823 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 TFDP3Q5H9I0 405 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 IER5LQ5T953 404 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 PAPD7Q5XG87 772 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 NCBP2-AS2Q69YL0 99 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 ASTLQ6HA08 431 aaPredicted RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 C1orf228Q6PIY5 440 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 MFSD7Q6UXD7 560 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 ZNF783Q6ZMS7 281 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 TPGS1Q6ZTW0 290 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 BBS12Q6ZW61 710 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 SETD3Q86TU7 594 aaPredicted RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 RALGPS2Q86X27 583 aaPredicted RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 CIR1Q86X95 450 aaPredicted RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 MAP7D3Q8IWC1 876 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 ARHGAP12Q8IWW6 846 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 UBALD2Q8IYN6 164 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 RCOR2Q8IZ40 523 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 ZNF687Q8N1G0 1237 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 CFAP52Q8N1V2 620 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 PLD5Q8N7P1 536 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 KCTD6Q8NC69 237 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 FIBINQ8TAL6 211 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 DDI1Q8WTU0 396 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 TMA16Q96EY4 203 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 ALG14Q96F25 216 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 NECAB3Q96P71 396 aaPredicted RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 RNF157Q96PX1 679 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 CALN1Q9BXU9 219 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 NOL6Q9H6R4 1146 aaKnown RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 LRRC19Q9H756 370 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 C8orf33Q9H7E9 229 aaPredicted RBP6.61□□□□□ -1.35
NCL-209ENST00000484328 CATSPERBQ9H7T0 1116 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 NDFIP2Q9NV92 336 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 MPP6Q9NZW5 540 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 CLEC4EQ9ULY5 219 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 SNX12Q9UMY4 172 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 MFHAS1Q9Y4C4 1052 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 OR51B4Q9Y5P0 310 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 MUC3AQ02505 3323 aa6.61□□□□□ -1.35
NCL-209ENST00000484328 A0A0A0MRY4 1105 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 ILVBLA1L0T0 632 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.6□□□□□ -1.35
NCL-209ENST00000484328 SPECC1L-ADORA2AF8WAN1 911 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 ENC1O14682 589 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 MFSD11O43934 449 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 PRLRP16471 622 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 OR1E1P30953 314 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 CD70P32970 193 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 CSKP41240 450 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 SOX9P48436 509 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 NDST2P52849 883 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 OXCT1P55809 520 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 YBEYP58557 167 aaPredicted RBP6.6□□□□□ -1.35
NCL-209ENST00000484328 AMPD2Q01433 879 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 PRKCQQ04759 706 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 ADCY2Q08462 1091 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 LMAN2Q12907 356 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 NR1H3Q13133 447 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 MMRN1Q13201 1228 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 SLC12A1Q13621 1099 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 CDH18Q13634 790 aa6.6□□□□□ -1.35
NCL-209ENST00000484328 EIF4HQ15056 248 aaKnown RBP6.6□□□□□ -1.35
NCL-209ENST00000484328 ANO4Q32M45 955 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms