RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GTF2H1P32780 548 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 HNF1BP35680 557 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 RGS7P49802 495 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 ZNF445P59923 1031 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 DNM1Q05193 864 aaKnown RBP13.36□□□□□ -0.27
UBR4-213ENST00000483922 CCDC173Q0VFZ6 552 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 PITRM1Q5JRX3 1037 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 LRRC69Q6ZNQ3 347 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 MFN1Q8IWA4 741 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 CACTIN-AS1Q8N1I8 211 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 SCML4Q8N228 414 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 FBXL13Q8NEE6 735 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 AZIN2Q96A70 460 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 SERAC1Q96JX3 654 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 RPL10LQ96L21 214 aaKnown RBP13.36□□□□□ -0.27
UBR4-213ENST00000483922 FCRL2Q96LA5 508 aaPredicted RBP13.36□□□□□ -0.27
UBR4-213ENST00000483922 NUCKS1Q9H1E3 243 aaKnown RBP13.36□□□□□ -0.27
UBR4-213ENST00000483922 ERVMER34-1Q9H9K5 563 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 LRRC4Q9HBW1 653 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 GDF3Q9NR23 364 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 SARDHQ9UL12 918 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 FZD4Q9ULV1 537 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 CA5BQ9Y2D0 317 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 PCDHB1Q9Y5F3 818 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 MYO18BQ8IUG5 2567 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 TARSL2A2RTX5 802 aaKnown RBP13.35□□□□□ -0.27
UBR4-213ENST00000483922 LRRC72A6NJI9 287 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 K7ELQ4 463 aaPredicted RBP13.35□□□□□ -0.27
UBR4-213ENST00000483922 RRP8O43159 456 aaKnown RBP13.35□□□□□ -0.27
UBR4-213ENST00000483922 SDC3O75056 442 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 F13A1P00488 732 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 ZSCAN22P10073 491 aaPredicted RBP13.35□□□□□ -0.27
UBR4-213ENST00000483922 CDK4P11802 303 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 KRT13P13646 458 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 CKMT2P17540 419 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 GLDCP23378 1020 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 ACP1P24666 158 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 STK19P49842 368 aaPredicted RBP13.35□□□□□ -0.27
UBR4-213ENST00000483922 CXADRP78310 365 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 CFHR1Q03591 330 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 BST2Q10589 180 aaKnown RBP13.35□□□□□ -0.27
UBR4-213ENST00000483922 DPYDQ12882 1025 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 SGO2Q562F6 1265 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 DCAF6Q58WW2 860 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 MS4A13Q5J8X5 152 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 SND1Q7KZF4 910 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBR4-213ENST00000483922 CARNMT1Q8N4J0 409 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 KDM1BQ8NB78 822 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 OR14C36Q8NHC7 312 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 SLC39A13Q96H72 371 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 IPO9Q96P70 1041 aaKnown RBP13.35□□□□□ -0.27
UBR4-213ENST00000483922 OMDQ99983 421 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 CNGB3Q9NQW8 809 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 COQ4Q9Y3A0 265 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 ITIH6Q6UXX5 1313 aa13.35□□□□□ -0.27
UBR4-213ENST00000483922 TEX51A0A1B0GUA7 166 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 PYCARD-AS1I3L0S3 204 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 SIGLEC6O43699 453 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 RTN2O75298 545 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 ASLP04424 464 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 MYF5P13349 255 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 PSMD8P48556 350 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 MXI1P50539 228 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 TBX4P57082 545 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 ST8SIA6P61647 398 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 KCNH2Q12809 1159 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 ILKQ13418 452 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 CUL2Q13617 745 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 TBC1D25Q3MII6 688 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 LCLAT1Q6UWP7 414 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.34□□□□□ -0.27
UBR4-213ENST00000483922 GUF1Q8N442 669 aaKnown RBP13.34□□□□□ -0.27
UBR4-213ENST00000483922 TTC39CQ8N584 583 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 MFSD2AQ8NA29 543 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 CCDC150Q8NCX0 1101 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 FRS2Q8WU20 508 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 HIC2Q96JB3 615 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 IRX2Q9BZI1 471 aaPredicted RBP13.34□□□□□ -0.27
UBR4-213ENST00000483922 CPNE5Q9HCH3 593 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 UCKL1Q9NWZ5 548 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 CYTH4Q9UIA0 394 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 CLCA2Q9UQC9 943 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 NAALADL1Q9UQQ1 740 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 DOCK9Q9BZ29 2069 aa13.34□□□□□ -0.27
UBR4-213ENST00000483922 TBC1D3DA0A087WVF3 549 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 TBC1D3IA0A087WXS9 549 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 TBC1D3EA0A087X179 549 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 TBC1D3KA0A087X1G2 549 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 TBC1D3FA6NER0 549 aaPredicted RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 TBC1D3LB9A6J9 549 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 RNF103O00237 685 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 IRAK2O43187 625 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 RNASEH1O60930 286 aaKnown RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 MT-CO3P00414 261 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 SRPRAP08240 638 aaKnown RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 TBC1D3HP0C7X1 549 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 VDRP11473 427 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 CD19P15391 556 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 C5AR1P21730 350 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 CMA1P23946 247 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms