RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 ZNHIT6Q9NWK9 470 aaKnown RBP27.32■■□□□ 1.96
GTF3C4-202ENST00000483873 A0A1W2PQF6 199 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 PSMA2P25787 234 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 MAPK8IP2Q13387 824 aaPredicted RBP27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 TSR1Q2NL82 804 aaKnown RBP27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 PITRM1Q5JRX3 1037 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 KIAA1211LQ6NV74 962 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 SCYL2Q6P3W7 929 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 CNGA4Q8IV77 575 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 APCDD1Q8J025 514 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 MDGA1Q8NFP4 955 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 OR52K2Q8NGK3 314 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 TPSD1Q9BZJ3 242 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 CD248Q9HCU0 757 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 MPP6Q9NZW5 540 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 KIAA1522Q9P206 1035 aaPredicted RBP27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 SCINQ9Y6U3 715 aa27.31■■□□□ 1.96
GTF3C4-202ENST00000483873 TCRBV21S2A2A0A5A6 115 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 PROB1E7EW31 1015 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 TIMM44O43615 452 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 SRGAP2O75044 1071 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 PRKCHP24723 683 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 CDC25BP30305 580 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 CSKP41240 450 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 ENPP2Q13822 863 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 ARL13BQ3SXY8 428 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 SDE2Q6IQ49 451 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 ARHGEF26Q96DR7 871 aa27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 POLMQ9NP87 494 aaPredicted RBP27.3■■□□□ 1.96
GTF3C4-202ENST00000483873 IGLV3-10A0A075B6K4 115 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 SSU72P8A0A1W2PR75 194 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 DRGXA6NNA5 263 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 AXIN1O15169 862 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 HRO43593 1189 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 POLR2EP19388 210 aaKnown RBP27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 MZF1P28698 734 aaPredicted RBP27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 SLC18A3Q16572 532 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 PTPRNQ16849 979 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 LRRC31Q6UY01 552 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 RASSF3Q86WH2 238 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 TC2NQ8N9U0 490 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 NTAN1Q96AB6 310 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 EBF1Q9UH73 591 aa27.29■■□□□ 1.96
GTF3C4-202ENST00000483873 NYNRINQ9P2P1 1898 aaKnown RBP27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 CCDC163A0A0D9SF12 145 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 FAM72CH0Y354 149 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 CLDN11O75508 207 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 HLA-EP13747 358 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 GALCP54803 685 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 CDH4P55283 916 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 PLEKHG6Q3KR16 790 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 FAM72AQ5TYM5 149 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 FAM72DQ6L9T8 149 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 TFAP2DQ7Z6R9 452 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 FAM72BQ86X60 149 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 ARFGAP1Q8N6T3 406 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 ZNF366Q8N895 744 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 HMGB4Q8WW32 186 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 TTC17Q96AE7 1141 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 DEF6Q9H4E7 631 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 MRPL47Q9HD33 250 aaKnown RBP27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 OR12D3Q9UGF7 316 aa27.28■■□□□ 1.96
GTF3C4-202ENST00000483873 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 NPC1O15118 1278 aa27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 DLDP09622 509 aaKnown RBP27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 CTSOP43234 321 aaPredicted RBP27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 ZNF177Q13360 481 aaPredicted RBP27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 FNDC3BQ53EP0 1204 aaKnown RBP27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 ACBD5Q5T8D3 534 aaPredicted RBP27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 MANEALQ5VSG8 457 aa27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 SERPINA13PQ6UXR4 307 aa27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 SLFN11Q7Z7L1 901 aa27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 PYROXD2Q8N2H3 581 aa27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 NKD2Q969F2 451 aaPredicted RBP27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 PACSIN1Q9BY11 444 aa27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 OSBPL2Q9H1P3 480 aa27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 NHEJ1Q9H9Q4 299 aaPredicted RBP27.27■■□□□ 1.96
GTF3C4-202ENST00000483873 ALDH1A2O94788 518 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 CYP1A2P05177 515 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 ATP5BP06576 529 aaKnown RBP27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 GABRG2P18507 467 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 SCAPQ12770 1279 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 ASCL5Q7RTU5 278 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 FNIP1Q8TF40 1166 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 ALG14Q96F25 216 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 MYO19Q96H55 970 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 SPTLC3Q9NUV7 552 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 BCCIPQ9P287 314 aaKnown RBP eCLIP27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 FZD10Q9ULW2 581 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 NEU3Q9UQ49 428 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 TBC1D30Q9Y2I9 924 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 SPAG17Q6Q759 2223 aa27.26■■□□□ 1.95
GTF3C4-202ENST00000483873 PLXND1Q9Y4D7 1925 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 AKR1B10O60218 316 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 NRG1Q02297 640 aaPredicted RBP27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 DAB2IPQ5VWQ8 1189 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 BTBD6Q96KE9 485 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 MRGPRX3Q96LB0 322 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 PEBP4Q96S96 227 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms