RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 SLC39A5Q6ZMH5 540 aa4.67□□□□□ -1.66
COMMD3-213ENST00000483684 ZFPM2Q8WW38 1151 aa4.67□□□□□ -1.66
COMMD3-213ENST00000483684 NR4A3Q92570 626 aa4.67□□□□□ -1.66
COMMD3-213ENST00000483684 CRB3Q9BUF7 120 aa4.67□□□□□ -1.66
COMMD3-213ENST00000483684 PAPOLBQ9NRJ5 636 aaKnown RBP4.67□□□□□ -1.66
COMMD3-213ENST00000483684 IPO11Q9UI26 975 aaKnown RBP4.67□□□□□ -1.66
COMMD3-213ENST00000483684 PCDHA12Q9UN75 941 aa4.67□□□□□ -1.66
COMMD3-213ENST00000483684 SLC12A4Q9UP95 1085 aa4.67□□□□□ -1.66
COMMD3-213ENST00000483684 ZBTB1Q9Y2K1 713 aa4.67□□□□□ -1.66
COMMD3-213ENST00000483684 GAS8-AS1O95177 125 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 SGPL1O95470 568 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 SYF2O95926 243 aaKnown RBP4.66□□□□□ -1.66
COMMD3-213ENST00000483684 GYS1P13807 737 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 HOXB2P14652 356 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 PDIA3P30101 505 aaKnown RBP4.66□□□□□ -1.66
COMMD3-213ENST00000483684 GRK5P34947 590 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 ALDH7A1P49419 539 aaKnown RBP4.66□□□□□ -1.66
COMMD3-213ENST00000483684 FOXL2P58012 376 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 SHC2P98077 582 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 TLE3Q04726 772 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 GALNT1Q10472 559 aaPredicted RBP4.66□□□□□ -1.66
COMMD3-213ENST00000483684 SF3A3Q12874 501 aaKnown RBP eCLIP4.66□□□□□ -1.66
COMMD3-213ENST00000483684 BRD3Q15059 726 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 C9orf50Q5SZB4 431 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 PGBD2Q6P3X8 592 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 RFX8Q6ZV50 586 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 ADGRF3Q8IZF5 1079 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 ATG16L2Q8NAA4 619 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 SLC39A13Q96H72 371 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 ZNF347Q96SE7 839 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 PIMREGQ9BSJ6 248 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 TUBB6Q9BUF5 446 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 ARHGAP39Q9C0H5 1083 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 ERVK-5Q9HDB9 667 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 DECR2Q9NUI1 292 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.66□□□□□ -1.66
COMMD3-213ENST00000483684 MSRB1Q9NZV6 116 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 NFU1Q9UMS0 254 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 DAAM1Q9Y4D1 1078 aa4.66□□□□□ -1.66
COMMD3-213ENST00000483684 TRBV5-3A0A0A0MS03 114 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 A0A1W2PPC1 479 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 FAM90A18PA6NE21 464 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 FAM90A16PA6NEW6 464 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 FAM90A9PA6NNJ1 464 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 SLC38A8A6NNN8 435 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 FAM90A5PA8MXJ8 464 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 SKAP2O75563 359 aaPredicted RBP4.65□□□□□ -1.67
COMMD3-213ENST00000483684 ALDOAP04075 364 aaKnown RBP4.65□□□□□ -1.67
COMMD3-213ENST00000483684 FAM90A15PP0C7V4 464 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 FAM90A14PP0C7W9 464 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 TGM2P21980 687 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 CDC25AP30304 524 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 RNASELQ05823 741 aaKnown RBP4.65□□□□□ -1.67
COMMD3-213ENST00000483684 PUM3Q15397 648 aaKnown RBP4.65□□□□□ -1.67
COMMD3-213ENST00000483684 ZACNQ401N2 412 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 ZNF569Q5MCW4 686 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 CAPRIN2Q6IMN6 1127 aaKnown RBP4.65□□□□□ -1.67
COMMD3-213ENST00000483684 C1orf228Q6PIY5 440 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 ADPRHL1Q8NDY3 354 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 DNASE2BQ8WZ79 361 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 MSI2Q96DH6 328 aaKnown RBP4.65□□□□□ -1.67
COMMD3-213ENST00000483684 KATNAL1Q9BW62 490 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 OSBPL5Q9H0X9 879 aaPredicted RBP4.65□□□□□ -1.67
COMMD3-213ENST00000483684 SFXN1Q9H9B4 322 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 PLCB1Q9NQ66 1216 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 COG5Q9UP83 839 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 CNTN6Q9UQ52 1028 aa4.65□□□□□ -1.67
COMMD3-213ENST00000483684 EVPLQ92817 2033 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3DA0A087WVF3 549 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3IA0A087WXS9 549 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3EA0A087X179 549 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3KA0A087X1G2 549 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 A0A0G2JK05 382 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TMEM272A0A1B0GTI8 110 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3BA6NDS4 549 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3FA6NER0 549 aaPredicted RBP4.64□□□□□ -1.67
COMMD3-213ENST00000483684 C3orf70A6NLC5 250 aaPredicted RBP4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3LB9A6J9 549 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 SYT5O00445 386 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 CYP3A4P08684 503 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 ALDOCP09972 364 aaKnown RBP4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3HP0C7X1 549 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 IGFBP2P18065 325 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 RBM6P78332 1123 aaKnown RBP4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TRIM60Q495X7 471 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 KIAA1755Q5JYT7 1200 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3GQ6DHY5 549 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3CQ6IPX1 549 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 PDXDC1Q6P996 788 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 B4GALNT4Q76KP1 1039 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 TBC1D3Q8IZP1 549 aaPredicted RBP4.64□□□□□ -1.67
COMMD3-213ENST00000483684 FAM47BQ8NA70 645 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 SLC44A5Q8NCS7 719 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 VPS37AQ8NEZ2 397 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 OR52N4Q8NGI2 321 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 CLEC4CQ8WTT0 213 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 HMGB4Q8WW32 186 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 RSC1A1Q92681 617 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 MIB2Q96AX9 1013 aa4.64□□□□□ -1.67
COMMD3-213ENST00000483684 LMLNQ96KR4 655 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms