RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 ATPAF2Q8N5M1 289 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 CCDC33Q8N5R6 958 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 PPM1NQ8N819 430 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 PDCD7Q8N8D1 485 aaKnown RBP12.23□□□□□ -0.45
SND1-210ENST00000483503 GDAP1Q8TB36 358 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 MZB1Q8WU39 189 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 LRRN4Q8WUT4 740 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 FBXO32Q969P5 355 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 TTC17Q96AE7 1141 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 DEFB118Q96PH6 123 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 PAIP2Q9BPZ3 127 aaKnown RBP12.23□□□□□ -0.45
SND1-210ENST00000483503 TTPALQ9BTX7 342 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 SIK2Q9H0K1 926 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 HIPK3Q9H422 1215 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 LRRC40Q9H9A6 602 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 MARCH5Q9NX47 278 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 BFARQ9NZS9 450 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 PLXNA3P51805 1871 aa12.23□□□□□ -0.45
SND1-210ENST00000483503 TTC3P53804 2025 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 A0A1W2PPM1 405 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 MTMR11A4FU01 709 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 TBC1D4O60343 1298 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 ALDH1A2O94788 518 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 POLBP06746 335 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 HAPLN1P10915 354 aaPredicted RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 CCL5P13501 91 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 RFC2P35250 354 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 MLLT6P55198 1093 aaPredicted RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 SLC18A2Q05940 514 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 IFT88Q13099 833 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 TRIP4Q15650 581 aaPredicted RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 PDK4Q16654 411 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 ANO4Q32M45 955 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 RNF187Q5TA31 235 aaPredicted RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 ARMC3Q5W041 872 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 NAPEPLDQ6IQ20 393 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 MARK2Q7KZI7 788 aaKnown RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 C4orf33Q8N1A6 199 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 AGGF1Q8N302 714 aaeCLIP12.22□□□□□ -0.45
SND1-210ENST00000483503 NPWQ8N729 165 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 BANPQ8N9N5 519 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 LRRC8CQ8TDW0 803 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 DEPDC1BQ8WUY9 529 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 SLC39A13Q96H72 371 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 APOPT1Q96IL0 206 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 FCRL2Q96LA5 508 aaPredicted RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 TEKT5Q96M29 485 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 ELAC2Q9BQ52 826 aaKnown RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 GPR62Q9BZJ7 368 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 IQCGQ9H095 443 aaKnown RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 RNF208Q9H0X6 261 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 NMUR1Q9HB89 426 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 MOCS1Q9NZB8 636 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 GMIPQ9P107 970 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 SFMBT1Q9UHJ3 866 aa12.22□□□□□ -0.45
SND1-210ENST00000483503 AAR2Q9Y312 384 aaKnown RBP12.22□□□□□ -0.45
SND1-210ENST00000483503 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.21□□□□□ -0.45
SND1-210ENST00000483503 WDR27A2RRH5 827 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 ARHGAP42A6NI28 874 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 FOXO6A8MYZ6 492 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 E9PAM4 449 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 KCNK1O00180 336 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 MATN3O15232 486 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 SNX3O60493 162 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 LPXNO60711 386 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 ANXA9O76027 345 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 MGAT1P26572 445 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 RPA3P35244 121 aaPredicted RBP12.21□□□□□ -0.45
SND1-210ENST00000483503 TUFMP49411 452 aaKnown RBP12.21□□□□□ -0.45
SND1-210ENST00000483503 ALDH7A1P49419 539 aaKnown RBP12.21□□□□□ -0.45
SND1-210ENST00000483503 TUBP50607 506 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 ARPP19P56211 112 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 WDR4P57081 412 aaKnown RBP12.21□□□□□ -0.45
SND1-210ENST00000483503 SESN2P58004 480 aaPredicted RBP12.21□□□□□ -0.45
SND1-210ENST00000483503 MTM1Q13496 603 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 IKBKEQ14164 716 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 USP41Q3LFD5 358 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 MGAT5BQ3V5L5 792 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 C1orf53Q5VUE5 145 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 CNKSR3Q6P9H4 555 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 TIFABQ6ZNK6 161 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 TRIM42Q8IWZ5 723 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 CRIPAKQ8N1N5 446 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 ZNF276Q8N554 614 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 RTL3Q8N8U3 475 aaKnown RBP12.21□□□□□ -0.45
SND1-210ENST00000483503 OVCA2Q8WZ82 227 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 FATE1Q969F0 183 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 BTN2A3PQ96KV6 586 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 VPS11Q9H270 941 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 KDM4CQ9H3R0 1056 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 RETREG1Q9H6L5 497 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 ACTR5Q9H9F9 607 aaPredicted RBP12.21□□□□□ -0.45
SND1-210ENST00000483503 CASS4Q9NQ75 786 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 MKS1Q9NXB0 559 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 USP15Q9Y4E8 981 aaPredicted RBP12.21□□□□□ -0.45
SND1-210ENST00000483503 SNX10Q9Y5X0 201 aa12.21□□□□□ -0.45
SND1-210ENST00000483503 BACE2Q9Y5Z0 518 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms