RNA–Protein interactions for RNA: ENST00000483092.1

CCSAP-204, Transcript of centriole, cilia and spindle associated protein, humanhuman

TSL 1 (best)

Gene CCSAP, Length 3,492 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSAP-204ENST00000483092 ZNF667Q5HYK9 610 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 MARVELD2Q8N4S9 558 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 NKD2Q969F2 451 aaPredicted RBP16.6■□□□□ 0.25
CCSAP-204ENST00000483092 NIFKQ9BYG3 293 aaKnown RBP16.6■□□□□ 0.25
CCSAP-204ENST00000483092 RPF1Q9H9Y2 349 aaKnown RBP16.6■□□□□ 0.25
CCSAP-204ENST00000483092 INIPQ9NRY2 104 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 WDR37Q9Y2I8 494 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 A0A087WZ62 844 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 TMX2-CTNND1H3BSU7 103 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 FBP2O00757 339 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 ZNF286BP0CG31 522 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 IL1R2P27930 398 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 IDH3AP50213 366 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 CLDN10P78369 228 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 PPM1JQ5JR12 505 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 BNC2Q6ZN30 1099 aaPredicted RBP16.6■□□□□ 0.25
CCSAP-204ENST00000483092 ADGRG6Q86SQ4 1221 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 WDR49Q8IV35 697 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 ACTRT2Q8TDY3 377 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 CPXM1Q96SM3 734 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 FDXACB1Q9BRP7 624 aaPredicted RBP16.6■□□□□ 0.25
CCSAP-204ENST00000483092 BRD8Q9H0E9 1235 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 ZNF358Q9NW07 568 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 EBF1Q9UH73 591 aa16.6■□□□□ 0.25
CCSAP-204ENST00000483092 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
CCSAP-204ENST00000483092 SF3B1O75533 1304 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■■■■■ 55.7
CCSAP-204ENST00000483092 M0QYV0 167 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 NOL3O60936 208 aaKnown RBP16.59■□□□□ 0.25
CCSAP-204ENST00000483092 ATG7O95352 703 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 CALB1P05937 261 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 OXCT1P55809 520 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 ITGADQ13349 1161 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 GPR107Q5VW38 600 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 RMND5BQ96G75 393 aaPredicted RBP16.59■□□□□ 0.25
CCSAP-204ENST00000483092 CORO1BQ9BR76 489 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 FAIMQ9NVQ4 179 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 C1orf232A0A0U1RR37 186 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.59■□□□□ 0.25
CCSAP-204ENST00000483092 CD1EP15812 388 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 TARBP2Q15633 366 aaKnown RBP16.59■□□□□ 0.25
CCSAP-204ENST00000483092 CES3Q6UWW8 571 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCSAP-204ENST00000483092 CASP10Q92851 521 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 GPR20Q99678 358 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 CIB1Q99828 191 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 OSBPL6Q9BZF3 934 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 GPATCH2LQ9NWQ4 482 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 C6orf203Q9P0P8 240 aaPredicted RBP16.59■□□□□ 0.25
CCSAP-204ENST00000483092 CNTN3Q9P232 1028 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 CEPT1Q9Y6K0 416 aa16.59■□□□□ 0.25
CCSAP-204ENST00000483092 TMEM247A6NEH6 219 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 GPR25O00155 361 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 ITGBL1O95965 494 aaPredicted RBP16.58■□□□□ 0.25
CCSAP-204ENST00000483092 EEF1B2P24534 225 aaKnown RBP16.58■□□□□ 0.25
CCSAP-204ENST00000483092 NUP107P57740 925 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 AMHR2Q16671 573 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 IER5Q5VY09 327 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 TMEM110Q86TL2 294 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 KIAA0319LQ8IZA0 1049 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 PCDH20Q8N6Y1 951 aaKnown RBP16.58■□□□□ 0.25
CCSAP-204ENST00000483092 SLC35B2Q8TB61 432 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 RCN3Q96D15 328 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 C1orf21Q9H246 121 aa16.58■□□□□ 0.25
CCSAP-204ENST00000483092 TNS1Q9HBL0 1735 aaKnown RBP16.58■□□□□ 0.25
CCSAP-204ENST00000483092 HOXC6P09630 235 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 RALBP11234 206 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 PTPN1P18031 435 aaKnown RBP16.58■□□□□ 0.24
CCSAP-204ENST00000483092 CD97P48960 835 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 DMPKQ09013 629 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 FAM102AQ5T9C2 384 aaPredicted RBP16.58■□□□□ 0.24
CCSAP-204ENST00000483092 ERI1Q8IV48 349 aaKnown RBP16.58■□□□□ 0.24
CCSAP-204ENST00000483092 AHI1Q8N157 1196 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 C12orf29Q8N999 325 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 DDX56Q9NY93 547 aaKnown RBP16.58■□□□□ 0.24
CCSAP-204ENST00000483092 SPATA7Q9P0W8 599 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 MYRFQ9Y2G1 1151 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 PSME4Q14997 1843 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 PHIPQ8WWQ0 1821 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 LACTBL1A8MY62 500 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 KDM1AO60341 852 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 PORP16435 677 aaPredicted RBP16.58■□□□□ 0.24
CCSAP-204ENST00000483092 EPHA3P29320 983 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 EFNA5P52803 228 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 RELAQ04206 551 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 KLF10Q13118 480 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 LDLRAP1Q5SW96 308 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 JADE1Q6IE81 842 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 FAM47BQ8NA70 645 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 KYQ8NBH2 561 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 ATP6V1E2Q96A05 226 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 COX4I2Q96KJ9 171 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 FERMT1Q9BQL6 677 aa16.58■□□□□ 0.24
CCSAP-204ENST00000483092 GCOM2Q9BZD3 368 aaPredicted RBP16.58■□□□□ 0.24
CCSAP-204ENST00000483092 H3BNX3 289 aa16.57■□□□□ 0.24
CCSAP-204ENST00000483092 POLR2BP30876 1174 aaKnown RBP16.57■□□□□ 0.24
CCSAP-204ENST00000483092 ICAM3P32942 547 aa16.57■□□□□ 0.24
CCSAP-204ENST00000483092 TTC33Q6PID6 262 aaPredicted RBP16.57■□□□□ 0.24
CCSAP-204ENST00000483092 KBTBD6Q86V97 674 aa16.57■□□□□ 0.24
CCSAP-204ENST00000483092 IFNLR1Q8IU57 520 aaPredicted RBP16.57■□□□□ 0.24
CCSAP-204ENST00000483092 RIOX2Q8IUF8 465 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms