RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 GPR155Q7Z3F1 870 aa13.29□□□□□ -0.28
TMEM54-206ENST00000482771 TBC1D3Q8IZP1 549 aaPredicted RBP13.29□□□□□ -0.28
TMEM54-206ENST00000482771 CFAP52Q8N1V2 620 aa13.29□□□□□ -0.28
TMEM54-206ENST00000482771 GUF1Q8N442 669 aaKnown RBP13.29□□□□□ -0.28
TMEM54-206ENST00000482771 AADATQ8N5Z0 425 aa13.29□□□□□ -0.28
TMEM54-206ENST00000482771 LSM14AQ8ND56 463 aaKnown RBP13.29□□□□□ -0.28
TMEM54-206ENST00000482771 BAP1Q92560 729 aa13.29□□□□□ -0.28
TMEM54-206ENST00000482771 FZD4Q9ULV1 537 aa13.29□□□□□ -0.28
TMEM54-206ENST00000482771 CAPN9O14815 690 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 IGLV3-27P01718 113 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 CKMT2P17540 419 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 EPHA8P29322 1005 aaPredicted RBP13.28□□□□□ -0.28
TMEM54-206ENST00000482771 PSMD8P48556 350 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 NXPH1P58417 271 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 ECT2LQ008S8 904 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 CCDC173Q0VFZ6 552 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 LRMPQ12912 555 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 CUL2Q13617 745 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 PKDCCQ504Y2 493 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 PITRM1Q5JRX3 1037 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 PMF1Q6P1K2 205 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.28□□□□□ -0.28
TMEM54-206ENST00000482771 SPATS2Q86XZ4 545 aaKnown RBP13.28□□□□□ -0.28
TMEM54-206ENST00000482771 CCDC117Q8IWD4 279 aaPredicted RBP13.28□□□□□ -0.28
TMEM54-206ENST00000482771 SCML4Q8N228 414 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 STK40Q8N2I9 435 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 ZNF843Q8N446 348 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 KDM1BQ8NB78 822 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 HJURPQ8NCD3 748 aaPredicted RBP13.28□□□□□ -0.28
TMEM54-206ENST00000482771 SLC35F5Q8WV83 523 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 DDX50Q9BQ39 737 aaKnown RBP13.28□□□□□ -0.28
TMEM54-206ENST00000482771 ERVMER34-1Q9H9K5 563 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 KIAA1257Q9ULG3 409 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 CEP83Q9Y592 693 aa13.28□□□□□ -0.28
TMEM54-206ENST00000482771 EDDM13A0A1B0GTR0 161 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 TYW5A2RUC4 315 aaKnown RBP13.27□□□□□ -0.29
TMEM54-206ENST00000482771 C10orf142B7Z368 130 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 O00370 1275 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 CETN3O15182 167 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 BRINP1O60477 761 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 MOCS3O95396 460 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 IL1BP01584 269 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 SRPRAP08240 638 aaKnown RBP13.27□□□□□ -0.29
TMEM54-206ENST00000482771 SETSIPP0DME0 302 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 PLA2G2AP14555 144 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 C5AR1P21730 350 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 GLDCP23378 1020 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 ACTN2P35609 894 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 SYKP43405 635 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 DPYDQ12882 1025 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 ILKQ13418 452 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 CDH18Q13634 790 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 CBWD6Q4V339 395 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 ZCWPW2Q504Y3 356 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 DCAF6Q58WW2 860 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 CBWD3Q5JTY5 395 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 CBWD5Q5RIA9 395 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 LCLAT1Q6UWP7 414 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 PRPF39Q86UA1 669 aaKnown RBP13.27□□□□□ -0.29
TMEM54-206ENST00000482771 APCDD1Q8J025 514 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 MFSD2AQ8NA29 543 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 SNIP1Q8TAD8 396 aaKnown RBP13.27□□□□□ -0.29
TMEM54-206ENST00000482771 CLEC4CQ8WTT0 213 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 IRGQQ8WZA9 623 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 TFAP2BQ92481 460 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 PTPRN2Q92932 1015 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 RPL10LQ96L21 214 aaKnown RBP13.27□□□□□ -0.29
TMEM54-206ENST00000482771 NUCKS1Q9H1E3 243 aaKnown RBP13.27□□□□□ -0.29
TMEM54-206ENST00000482771 CLCA2Q9UQC9 943 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 HPSEQ9Y251 543 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 MGAQ8IWI9 3026 aa13.27□□□□□ -0.29
TMEM54-206ENST00000482771 TEX51A0A1B0GUA7 166 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 LTFP02788 710 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 EPB41P11171 864 aaKnown RBP13.26□□□□□ -0.29
TMEM54-206ENST00000482771 MAT2AP31153 395 aaKnown RBP13.26□□□□□ -0.29
TMEM54-206ENST00000482771 NDUFA8P51970 172 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 ADPRHP54922 357 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 YWHAEP62258 255 aaKnown RBP13.26□□□□□ -0.29
TMEM54-206ENST00000482771 INSM1Q01101 510 aaPredicted RBP13.26□□□□□ -0.29
TMEM54-206ENST00000482771 PKP1Q13835 747 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 CNGA2Q16280 664 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 EDRF1Q3B7T1 1238 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 MS4A13Q5J8X5 152 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 SFMBT2Q5VUG0 894 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 TCERG1LQ5VWI1 586 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 RNF219Q5W0B1 726 aaPredicted RBP13.26□□□□□ -0.29
TMEM54-206ENST00000482771 KANSL1Q7Z3B3 1105 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 CACTIN-AS1Q8N1I8 211 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 FCRL2Q96LA5 508 aaPredicted RBP13.26□□□□□ -0.29
TMEM54-206ENST00000482771 PRICKLE1Q96MT3 831 aaPredicted RBP13.26□□□□□ -0.29
TMEM54-206ENST00000482771 MIS12Q9H081 205 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 ARHGAP20Q9P2F6 1191 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 COQ4Q9Y3A0 265 aa13.26□□□□□ -0.29
TMEM54-206ENST00000482771 MYLKQ15746 1914 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 LATO43561 262 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 SIGLEC6O43699 453 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 SDC3O75056 442 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 LUC7L3O95232 432 aaKnown RBP13.25□□□□□ -0.29
TMEM54-206ENST00000482771 MOCS2O96007 188 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms