RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 FBRSQ9HAH7 460 aa15.29■□□□□ 0.04
OPTN-210ENST00000482140 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
OPTN-210ENST00000482140 SPTBN4Q9H254 2564 aa15.29■□□□□ 0.04
OPTN-210ENST00000482140 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.28■□□□□ 0.04
OPTN-210ENST00000482140 PDGFRAP16234 1089 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 SDC4P31431 198 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 COPAP53621 1224 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 ATP11AP98196 1134 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 ZNF177Q13360 481 aaPredicted RBP15.28■□□□□ 0.04
OPTN-210ENST00000482140 CAMK2GQ13555 558 aaPredicted RBP15.28■□□□□ 0.04
OPTN-210ENST00000482140 ASIC2Q16515 512 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 PLEKHG6Q3KR16 790 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 ACBD5Q5T8D3 534 aaPredicted RBP15.28■□□□□ 0.04
OPTN-210ENST00000482140 METTL3Q86U44 580 aaKnown RBP15.28■□□□□ 0.04
OPTN-210ENST00000482140 DEFB119Q8N690 84 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 IGSF8Q969P0 613 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 NAP1L5Q96NT1 182 aaPredicted RBP15.28■□□□□ 0.04
OPTN-210ENST00000482140 ADAM33Q9BZ11 813 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 CD93Q9NPY3 652 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 INTS6Q9UL03 887 aaKnown RBP15.28■□□□□ 0.04
OPTN-210ENST00000482140 TNRC6BQ9UPQ9 1833 aaKnown RBP15.28■□□□□ 0.04
OPTN-210ENST00000482140 GON4LQ3T8J9 2241 aa15.28■□□□□ 0.04
OPTN-210ENST00000482140 CEP250Q9BV73 2442 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 FRYLO94915 3013 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 ANKRD62A6NC57 917 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 LRRC53A6NM62 1247 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 KHNYNO15037 678 aaKnown RBP15.27■□□□□ 0.04
OPTN-210ENST00000482140 CLDN11O75508 207 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 SRPRAP08240 638 aaKnown RBP15.27■□□□□ 0.04
OPTN-210ENST00000482140 KRT3P12035 628 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 CD6P30203 668 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 OXTRP30559 389 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 NNMTP40261 264 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 PTGER3P43115 390 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 ATXN1P54253 815 aaKnown RBP15.27■□□□□ 0.04
OPTN-210ENST00000482140 CDH4P55283 916 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 ECT2LQ008S8 904 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 SULT2A1Q06520 285 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 CDO1Q16878 200 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 ZSCAN23Q3MJ62 389 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 TRNP1Q6NT89 227 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 C14orf80Q86SX3 495 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 FAM131BQ86XD5 332 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 PHF13Q86YI8 300 aaPredicted RBP15.27■□□□□ 0.04
OPTN-210ENST00000482140 SYT12Q8IV01 421 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 APCDD1Q8J025 514 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 RXFP2Q8WXD0 754 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 ITM2CQ9NQX7 267 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 USP36Q9P275 1121 aaKnown RBP15.27■□□□□ 0.04
OPTN-210ENST00000482140 ERVW-1Q9UQF0 538 aa15.27■□□□□ 0.04
OPTN-210ENST00000482140 PI4KAP42356 2102 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 ATXN2Q99700 1313 aaKnown RBP15.26■□□□□ 0.03
OPTN-210ENST00000482140 GDF9O60383 454 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 RNASEH1O60930 286 aaKnown RBP15.26■□□□□ 0.03
OPTN-210ENST00000482140 GJB6O95452 261 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 DNTTP04053 509 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 MZF1P28698 734 aaPredicted RBP15.26■□□□□ 0.03
OPTN-210ENST00000482140 CTSOP43234 321 aaPredicted RBP15.26■□□□□ 0.03
OPTN-210ENST00000482140 NUMBP49757 651 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 TPMTP51580 245 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 GSCP56915 257 aaPredicted RBP15.26■□□□□ 0.03
OPTN-210ENST00000482140 FANCCQ00597 558 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 ZNF33AQ06730 810 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
OPTN-210ENST00000482140 PTP4A2Q12974 167 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 ARL13BQ3SXY8 428 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 SFMBT2Q5VUG0 894 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 TCEAL6Q6IPX3 200 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 PPP1R2P3Q6NXS1 205 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 DNAJC24Q6P3W2 148 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 LRSAM1Q6UWE0 723 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 DGLUCYQ7Z3D6 616 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 KDM1BQ8NB78 822 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 C3orf20Q8ND61 904 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 JOSD2Q8TAC2 188 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 BAP1Q92560 729 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 TCEAL3Q969E4 200 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 TOE1Q96GM8 510 aaKnown RBP15.26■□□□□ 0.03
OPTN-210ENST00000482140 HSPA12BQ96MM6 686 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 HAPLN3Q96S86 360 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 RTKNQ9BST9 563 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 PRSS16Q9NQE7 514 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 ANLNQ9NQW6 1124 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 DLL3Q9NYJ7 618 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 SLC25A13Q9UJS0 675 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 WDR87Q6ZQQ6 2873 aa15.26■□□□□ 0.03
OPTN-210ENST00000482140 EDDM13A0A1B0GTR0 161 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 C2CD4BA6NLJ0 364 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 MEI4A8MW99 385 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 SRGAP2O75044 1071 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 RHOCP08134 193 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 DESP17661 470 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 GPD1P21695 349 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 ITPKAP23677 461 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 PTPN9P43378 593 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 IRAK1P51617 712 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 UBASH3AP57075 661 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 NR1I3Q14994 352 aa15.25■□□□□ 0.03
OPTN-210ENST00000482140 C15orf59Q2T9L4 293 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms