RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CPXM2Q8N436 756 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 UBL4BQ8N7F7 174 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 KRT35Q92764 455 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 NXPE3Q969Y0 559 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 HES6Q96HZ4 224 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 ASB2Q96Q27 587 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 PRMT1Q99873 361 aaKnown RBP11.95□□□□□ -0.5
HPS4-212ENST00000481910 KLHL11Q9NVR0 708 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 DDX56Q9NY93 547 aaKnown RBP11.95□□□□□ -0.5
HPS4-212ENST00000481910 VANGL2Q9ULK5 521 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 V9GYY5 206 aaPredicted RBP11.95□□□□□ -0.5
HPS4-212ENST00000481910 LRRD1A4D1F6 860 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 ENC1O14682 589 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 TSPAN3O60637 253 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 GDI1P31150 447 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 MARCKSL1P49006 195 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 CDH6P55285 790 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 KRT81Q14533 505 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 CRYMQ14894 314 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 RPS6KA1Q15418 735 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 DPYSL2Q16555 572 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 HHATQ5VTY9 493 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 TRIM68Q6AZZ1 485 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 FBXL22Q6P050 247 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 MAP7D3Q8IWC1 876 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 LGI2Q8N0V4 545 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 SLC44A3Q8N4M1 653 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 PHC3Q8NDX5 983 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 TMA16Q96EY4 203 aaKnown RBP11.94□□□□□ -0.5
HPS4-212ENST00000481910 FAM83CQ9BQN1 747 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 CALN1Q9BXU9 219 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 EBF3Q9H4W6 596 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 MYOFQ9NZM1 2061 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 TCF20Q9UGU0 1960 aaKnown RBP11.94□□□□□ -0.5
HPS4-212ENST00000481910 E9PAM4 449 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 PI4K2BG5E9Z4 385 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 CHADO15335 359 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 LRIG2O94898 1065 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 KRT1P04264 644 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 ASGR2P07307 311 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 BMP1P13497 986 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 KDELR1P24390 212 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 ARL4AP40617 200 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 PEX5P50542 639 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 GYS2P54840 703 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 ZP2Q05996 745 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 PDK2Q15119 407 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 PDGFRLQ15198 375 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 EML3Q32P44 896 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 C14orf80Q86SX3 495 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 MYLK4Q86YV6 388 aaPredicted RBP11.94□□□□□ -0.5
HPS4-212ENST00000481910 FAM217AQ8IXS0 508 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 KATNAL2Q8IYT4 538 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 DDI1Q8WTU0 396 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 RAPGEF5Q92565 580 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 ASIC4Q96FT7 647 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 C16orf45Q96MC5 204 aaPredicted RBP11.94□□□□□ -0.5
HPS4-212ENST00000481910 RPRD1AQ96P16 312 aaPredicted RBP11.94□□□□□ -0.5
HPS4-212ENST00000481910 WDR24Q96S15 920 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 KCTD15Q96SI1 283 aaPredicted RBP11.94□□□□□ -0.5
HPS4-212ENST00000481910 EPAS1Q99814 870 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 BRD9Q9H8M2 597 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 SPHK2Q9NRA0 654 aa11.94□□□□□ -0.5
HPS4-212ENST00000481910 EEF2KO00418 725 aaKnown RBP11.93□□□□□ -0.5
HPS4-212ENST00000481910 DDX3YO15523 660 aaKnown RBP11.93□□□□□ -0.5
HPS4-212ENST00000481910 DAPK3O43293 454 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 SNUPNO95149 360 aaKnown RBP11.93□□□□□ -0.5
HPS4-212ENST00000481910 CYBBP04839 570 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 CD48P09326 243 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 ARSAP15289 507 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 EPHB2P29323 1055 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 TPI1P60174 286 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 NRG1Q02297 640 aaPredicted RBP11.93□□□□□ -0.5
HPS4-212ENST00000481910 TNK2Q07912 1038 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 SEMA3BQ13214 749 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 ANO4Q32M45 955 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 MPPE1Q53F39 396 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 LY6G5CQ5SRR4 150 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 NAIF1Q69YI7 327 aaPredicted RBP11.93□□□□□ -0.5
HPS4-212ENST00000481910 TTC19Q6DKK2 380 aaPredicted RBP11.93□□□□□ -0.5
HPS4-212ENST00000481910 RWDD4Q6NW29 188 aaKnown RBP11.93□□□□□ -0.5
HPS4-212ENST00000481910 RHBDF2Q6PJF5 856 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 TMEM25Q86YD3 366 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 CCDC50Q8IVM0 306 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 RCOR2Q8IZ40 523 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 CFAP52Q8N1V2 620 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 ALG3Q92685 438 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 IRF7Q92985 503 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 ATP2A3Q93084 1043 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 IGSF8Q969P0 613 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 TLR10Q9BXR5 811 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 RSPH9Q9H1X1 276 aaPredicted RBP11.93□□□□□ -0.5
HPS4-212ENST00000481910 PCDH18Q9HCL0 1135 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 MPP6Q9NZW5 540 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 STIM2Q9P246 746 aa11.93□□□□□ -0.5
HPS4-212ENST00000481910 TYW5A2RUC4 315 aaKnown RBP11.92□□□□□ -0.5
HPS4-212ENST00000481910 NFATC1O95644 943 aa11.92□□□□□ -0.5
HPS4-212ENST00000481910 GOT1P17174 413 aa11.92□□□□□ -0.5
HPS4-212ENST00000481910 ARSEP51690 589 aa11.92□□□□□ -0.5
HPS4-212ENST00000481910 ZNF135P52742 658 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms