RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ADAT2Q7Z6V5 191 aaKnown RBP15.76■□□□□ 0.11
LIMS3-203ENST00000480744 CIR1Q86X95 450 aaPredicted RBP15.76■□□□□ 0.11
LIMS3-203ENST00000480744 MMAAQ8IVH4 418 aaKnown RBP15.76■□□□□ 0.11
LIMS3-203ENST00000480744 APCDD1Q8J025 514 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 DEFB106AQ8N104 65 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 KDF1Q8NAX2 398 aaPredicted RBP15.76■□□□□ 0.11
LIMS3-203ENST00000480744 CPXM1Q96SM3 734 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 DDIT4Q9NX09 232 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 PCOLCE2Q9UKZ9 415 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 SNX11Q9Y5W9 270 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 EDDM13A0A1B0GTR0 161 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 A0A1W2PP55 124 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 KCNU1A8MYU2 1149 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 MID1O15344 667 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 RNASEH2AO75792 299 aaKnown RBP15.75■□□□□ 0.11
LIMS3-203ENST00000480744 IGLV3-25P01717 112 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 SRPRAP08240 638 aaKnown RBP15.75■□□□□ 0.11
LIMS3-203ENST00000480744 ZNF883P0CG24 379 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 PDGFRAP16234 1089 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 ABCB4P21439 1286 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 CD27P26842 260 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 PSMD8P48556 350 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 SFSWAPQ12872 951 aaKnown RBP15.75■□□□□ 0.11
LIMS3-203ENST00000480744 CST6Q15828 149 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 KIAA0895LQ68EN5 471 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 OR6B2Q6IFH4 312 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 USP30Q70CQ3 517 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 RAB44Q7Z6P3 723 aaPredicted RBP15.75■□□□□ 0.11
LIMS3-203ENST00000480744 SHC3Q92529 594 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 PPP1R13BQ96KQ4 1090 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 RPL10LQ96L21 214 aaKnown RBP15.75■□□□□ 0.11
LIMS3-203ENST00000480744 NOX5Q96PH1 765 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 OMDQ99983 421 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.75■□□□□ 0.11
LIMS3-203ENST00000480744 SERGEFQ9UGK8 458 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 SLCO3A1Q9UIG8 710 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 SCML1Q9UN30 329 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 APOBEC2Q9Y235 224 aaKnown RBP15.75■□□□□ 0.11
LIMS3-203ENST00000480744 ANKRD6Q9Y2G4 727 aa15.75■□□□□ 0.11
LIMS3-203ENST00000480744 KCNK3O14649 394 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 HSF2BPO75031 334 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 C7P10643 843 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 SLC2A3P11169 496 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 PON1P27169 355 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 GRIA4P48058 902 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 STK19P49842 368 aaPredicted RBP15.74■□□□□ 0.11
LIMS3-203ENST00000480744 PTK2Q05397 1052 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 EFHC1Q5JVL4 640 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 RABGAP1LQ5R372 815 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 C9orf64Q5T6V5 341 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 FAM183BPQ6ZVS7 135 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 IRF2BP1Q8IU81 584 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 CCAR2Q8N163 923 aaKnown RBP15.74■□□□□ 0.11
LIMS3-203ENST00000480744 WDTC1Q8N5D0 677 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 KDM1BQ8NB78 822 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 C1orf131Q8NDD1 294 aaKnown RBP15.74■□□□□ 0.11
LIMS3-203ENST00000480744 SYNCQ9H7C4 482 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 DNAJC12Q9UKB3 198 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 AJAP1Q9UKB5 411 aaPredicted RBP15.74■□□□□ 0.11
LIMS3-203ENST00000480744 RALYQ9UKM9 306 aaKnown RBP15.74■□□□□ 0.11
LIMS3-203ENST00000480744 PLXNB3Q9ULL4 1909 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 CHD6Q8TD26 2715 aa15.74■□□□□ 0.11
LIMS3-203ENST00000480744 ITIH6Q6UXX5 1313 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 TARSL2A2RTX5 802 aaKnown RBP15.73■□□□□ 0.11
LIMS3-203ENST00000480744 GTPBP10A4D1E9 387 aaKnown RBP15.73■□□□□ 0.11
LIMS3-203ENST00000480744 LRRC72A6NJI9 287 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 GOLGA8CPA6NN73 597 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 FLRT2O43155 660 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 CBFA2T3O75081 653 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 PNMA6AP0CW24 399 aaPredicted RBP15.73■□□□□ 0.11
LIMS3-203ENST00000480744 CCR1P32246 355 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 SLC8A1P32418 973 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 KRT9P35527 623 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 NNMTP40261 264 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 GALCP54803 685 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 CENPCQ03188 943 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 NME3Q13232 169 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 SUZ12Q15022 739 aaKnown RBP15.73■□□□□ 0.11
LIMS3-203ENST00000480744 NCEH1Q6PIU2 408 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 C11orf57Q6ZUT1 292 aaPredicted RBP15.73■□□□□ 0.11
LIMS3-203ENST00000480744 STK40Q8N2I9 435 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 MLKLQ8NB16 471 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 RHBDD1Q8TEB9 315 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 ADAMTS14Q8WXS8 1223 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 RPRD1AQ96P16 312 aaPredicted RBP15.73■□□□□ 0.11
LIMS3-203ENST00000480744 SLC2A13Q96QE2 648 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 NEUROG2Q9H2A3 272 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 OSGEPQ9NPF4 335 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 PLCB1Q9NQ66 1216 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 ASNSD1Q9NWL6 643 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 PCDHGC3Q9UN70 934 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 PCDHGB2Q9Y5G2 931 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 CFAP47Q6ZTR5 3102 aa15.73■□□□□ 0.11
LIMS3-203ENST00000480744 DOCK9Q9BZ29 2069 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 A0A1B0GVM2 712 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 TCAF2A6NFQ2 919 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 IL1BP01584 269 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 ERBB2P04626 1255 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 IGHV4-34P06331 123 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms