RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 DEFB106AQ8N104 65 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 MINDY1Q8N5J2 469 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 CYB5D2Q8WUJ1 264 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 RPRD1AQ96P16 312 aaPredicted RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 SPAG5Q96R06 1193 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 C2orf49Q9BVC5 232 aaPredicted RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 GTPBP2Q9BX10 602 aaKnown RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 WDCPQ9H6R7 721 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCM2-213ENST00000480658 CYTH4Q9UIA0 394 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 CKAP5Q14008 2032 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 ATXN2Q99700 1313 aaKnown RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 CXorf51AA0A1B0GTR3 108 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 M0QYT0 321 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 SLC7A4O43246 635 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 C5AR1P21730 350 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 CLCN1P35523 988 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 GRIA4P48058 902 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 SGSHP51688 502 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 CDH4P55283 916 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 KRT83P78385 493 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 ZNF252P-AS1Q0IIN9 211 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 SEMA3BQ13214 749 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 NME3Q13232 169 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 SUZ12Q15022 739 aaKnown RBP11.81□□□□□ -0.52
CCM2-213ENST00000480658 UAP1L1Q3KQV9 507 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 ARL13BQ3SXY8 428 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 PTPN20Q4JDL3 420 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 C6orf118Q5T5N4 469 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 FAM102AQ5T9C2 384 aaPredicted RBP11.81□□□□□ -0.52
CCM2-213ENST00000480658 ZNF783Q6ZMS7 281 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 SETD3Q86TU7 594 aaPredicted RBP11.81□□□□□ -0.52
CCM2-213ENST00000480658 CCAR2Q8N163 923 aaKnown RBP11.81□□□□□ -0.52
CCM2-213ENST00000480658 FRMD1Q8N878 549 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 SORCS1Q8WY21 1168 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 P2RY11Q96G91 374 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 C1orf74Q96LT6 269 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 NAA15Q9BXJ9 866 aaKnown RBP11.81□□□□□ -0.52
CCM2-213ENST00000480658 KDM4CQ9H3R0 1056 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 PRSS16Q9NQE7 514 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 LMBRD1Q9NUN5 540 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 ADAMTS1Q9UHI8 967 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 ERVW-1Q9UQF0 538 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 ATG2BQ96BY7 2078 aa11.81□□□□□ -0.52
CCM2-213ENST00000480658 GOLGA6L7A0A1B0GV03 622 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 TMEM8BA6NDV4 472 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 C1QTNF3-AMACRE9PGA6 284 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 YKT6O15498 198 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 ERBB2P04626 1255 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 HLA-EP13747 358 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 CD27P26842 260 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 ETFBP38117 255 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 SULT1E1P49888 294 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 CLCN6P51797 869 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 RPS14P62263 151 aaKnown RBP11.8□□□□□ -0.52
CCM2-213ENST00000480658 DEUP1Q05D60 604 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 CST6Q15828 149 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 ZNF423Q2M1K9 1284 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 C5orf22Q49AR2 442 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 SLC45A4Q5BKX6 768 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 CDKAL1Q5VV42 579 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 WDTC1Q8N5D0 677 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 EPS8L1Q8TE68 723 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 GANCQ8TET4 914 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 NT5C3BQ969T7 300 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 LMLNQ96KR4 655 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 PRMT1Q99873 361 aaKnown RBP11.8□□□□□ -0.52
CCM2-213ENST00000480658 OMDQ99983 421 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 MIR1-1HGQ9H1L0 117 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 SLC6A17Q9H1V8 727 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 PABPC3Q9H361 631 aaKnown RBP11.8□□□□□ -0.52
CCM2-213ENST00000480658 ACP6Q9NPH0 428 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 SAMSN1Q9NSI8 373 aaKnown RBP11.8□□□□□ -0.52
CCM2-213ENST00000480658 ARHGEF38Q9NXL2 777 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.8□□□□□ -0.52
CCM2-213ENST00000480658 PCDHB9Q9Y5E1 797 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 PCDHGB2Q9Y5G2 931 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 FHOD1Q9Y613 1164 aa11.8□□□□□ -0.52
CCM2-213ENST00000480658 SYNJ2BP-COX16A0A087WUM0 186 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 ANKRD62A6NC57 917 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 CALCAP01258 141 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 CDK11BP21127 795 aaKnown RBP11.79□□□□□ -0.52
CCM2-213ENST00000480658 STAT1P42224 750 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 NSFP46459 744 aaKnown RBP11.79□□□□□ -0.52
CCM2-213ENST00000480658 CXCR3P49682 368 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 CDR2Q01850 454 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 GRIK2Q13002 908 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 AUHQ13825 339 aaKnown RBP11.79□□□□□ -0.52
CCM2-213ENST00000480658 CCDC183Q5T5S1 534 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 N4BP2L1Q5TBK1 243 aaPredicted RBP11.79□□□□□ -0.52
CCM2-213ENST00000480658 FBXL22Q6P050 247 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 ADAT2Q7Z6V5 191 aaKnown RBP11.79□□□□□ -0.52
CCM2-213ENST00000480658 CFAP52Q8N1V2 620 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 ZCCHC9Q8N567 271 aaKnown RBP11.79□□□□□ -0.52
CCM2-213ENST00000480658 NEK11Q8NG66 645 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 WFDC5Q8TCV5 224 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 OR8D1Q8WZ84 308 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 SNX19Q92543 992 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 HAPLN3Q96S86 360 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms