RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 SLC2A11Q9BYW1 496 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 ECT2Q9H8V3 914 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 MPP6Q9NZW5 540 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 FBXO10Q9UK96 956 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 TBC1D30Q9Y2I9 924 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 NYNRINQ9P2P1 1898 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 COL6A3P12111 3177 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 NUP205Q92621 2012 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 TRDMT1O14717 391 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 APOL1O14791 398 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 DAPK3O43293 454 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 TSPAN3O60637 253 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 TBL1XO60907 577 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 CNTN5O94779 1100 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 ADH5P11766 374 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 ARSAP15289 507 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 TGM2P21980 687 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 GDI1P31150 447 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 EIF2DP41214 584 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 NR1H3Q13133 447 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 RUNX3Q13761 415 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 GAB4Q2WGN9 574 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 AFMIDQ63HM1 303 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 RWDD4Q6NW29 188 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 AADACL2Q6P093 401 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 TMCO3Q6UWJ1 677 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 ZNF783Q6ZMS7 281 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 TPGS1Q6ZTW0 290 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 TMEM25Q86YD3 366 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 SLC13A5Q86YT5 568 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 ETFBKMTQ8IXQ9 262 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 UMODL1-AS1Q8N2C9 162 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 SLC44A3Q8N4M1 653 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 KIF18AQ8NI77 898 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 DDI1Q8WTU0 396 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 RSAD2Q8WXG1 361 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 ZFYVE19Q96K21 471 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 PSMB7Q99436 277 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 HERPUD2Q9BSE4 406 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 BBS2Q9BXC9 721 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 KLC2Q9H0B6 622 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 EBF3Q9H4W6 596 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 BRD9Q9H8M2 597 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 SLC2A4RGQ9NR83 387 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 RNF14Q9UBS8 474 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 LIMD1Q9UGP4 676 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 RAD54BQ9Y620 910 aa12.9□□□□□ -0.34
TRAPPC12-218ENST00000479897 APOC4-APOC2K7ER74 178 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 PGRMC1O00264 195 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 CST8O60676 142 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 TJP3O95049 919 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 APOC2P02655 101 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 BMP1P13497 986 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 KRT10P13645 584 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 TYRP14679 529 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 AMPD1P23109 780 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 CXCR5P32302 372 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 NDST2P52849 883 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 OXCT1P55809 520 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 ADCY2Q08462 1091 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 TUBB2AQ13885 445 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 ITPRIPL2Q3MIP1 535 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 C6orf118Q5T5N4 469 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 CXorf57Q6NSI4 855 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 CIR1Q86X95 450 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 RFX6Q8HWS3 928 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 MFN1Q8IWA4 741 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 CFAP52Q8N1V2 620 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 NPWQ8N729 165 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 ST13P5Q8NFI4 369 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 FIBINQ8TAL6 211 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 COG1Q8WTW3 980 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 MAIP1Q8WWC4 291 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 MSANTD3Q96H12 275 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 ASB2Q96Q27 587 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 NAP1L3Q99457 506 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 TUBB2BQ9BVA1 445 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 MAK16Q9BXY0 300 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 ETNK2Q9NVF9 386 aa12.89□□□□□ -0.35
TRAPPC12-218ENST00000479897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 CXorf51AA0A1B0GTR3 108 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 ILVBLA1L0T0 632 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 OTOL1A6NHN0 477 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 NEDD8-MDP1E9PL57 170 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 MFSD11O43934 449 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 CEP104O60308 925 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 FGGP02679 453 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 ASGR2P07307 311 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 SRFP11831 508 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 ETFBP38117 255 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 NR2C2P49116 596 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 YBEYP58557 167 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 PFKPQ01813 784 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 TNK2Q07912 1038 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 ZNF177Q13360 481 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 TDGQ13569 410 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 SLC12A1Q13621 1099 aa12.88□□□□□ -0.35
TRAPPC12-218ENST00000479897 CDH18Q13634 790 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms