RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 TSGA10Q9BZW7 698 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 PRDM16Q9HAZ2 1276 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 CNOT8Q9UFF9 292 aaKnown RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 CHORDC1Q9UHD1 332 aaPredicted RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 EVLQ9UI08 416 aaPredicted RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 MBD1Q9UIS9 605 aaPredicted RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 LSM7Q9UK45 103 aaKnown RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 KIAA1549LQ6ZVL6 1849 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 CHD5Q8TDI0 1954 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 MYOFQ9NZM1 2061 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 PI4KAP42356 2102 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 IGLV3-10A0A075B6K4 115 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 SOWAHDA6NJG2 315 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 C4orf47A7E2U8 309 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 UPK3BL1B0FP48 263 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 UPK3BL2E5RIL1 263 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 CAPN9O14815 690 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 MDM4O15151 490 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 PENKP01210 267 aaPredicted RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 C7P10643 843 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 MBL2P11226 248 aaPredicted RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 CSRP1P21291 193 aaKnown RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 GPD1P21695 349 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 SLC1A1P43005 524 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 IRX4P78413 519 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 ZNF252P-AS1Q0IIN9 211 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 ELF2Q15723 593 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 ST3GAL2Q16842 350 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 DCAF6Q58WW2 860 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 LY6G5CQ5SRR4 150 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 MANEALQ5VSG8 457 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 SYPL2Q5VXT5 272 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 TRNP1Q6NT89 227 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 C11orf63Q6NUN7 778 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 RSRC2Q7L4I2 434 aaKnown RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 FRMD1Q8N878 549 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 C12orf50Q8NA57 414 aaPredicted RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 ZNF564Q8TBZ8 553 aaPredicted RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 TEKT4Q8WW24 435 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 DDX50Q9BQ39 737 aaKnown RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 THAP2Q9H0W7 228 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 OSBPL2Q9H1P3 480 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 METTL5Q9NRN9 209 aaKnown RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 TMEM74BQ9NUR3 256 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 CFAP97Q9P2B7 532 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 RCOR3Q9P2K3 495 aaPredicted RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 IP6K2Q9UHH9 426 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 FBXO10Q9UK96 956 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 ANGPTL2Q9UKU9 493 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 REXO2Q9Y3B8 237 aaKnown RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 DOCK4Q8N1I0 1966 aa9.22□□□□□ -0.93
DDX56-211ENST00000479602 SMG1Q96Q15 3661 aaKnown RBP9.22□□□□□ -0.93
DDX56-211ENST00000479602 CELSR3Q9NYQ7 3312 aa9.21□□□□□ -0.93
DDX56-211ENST00000479602 A0A1W2PQF6 199 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 FAM221BA6H8Z2 402 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 GIPC1O14908 333 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 PROSCO94903 275 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 APOEP02649 317 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 CISD3P0C7P0 127 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 CEACAM1P13688 526 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 PDGFRAP16234 1089 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 MAGEA1P43355 309 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 HARS2P49590 506 aaKnown RBP9.21□□□□□ -0.94
DDX56-211ENST00000479602 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.94
DDX56-211ENST00000479602 HDAC4P56524 1084 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 RPL7AP62424 266 aaKnown RBP9.21□□□□□ -0.94
DDX56-211ENST00000479602 CREB5Q02930 508 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 SEMA3BQ13214 749 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 TAF5Q15542 800 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 IFI16Q16666 785 aaKnown RBP9.21□□□□□ -0.94
DDX56-211ENST00000479602 CCDC14Q49A88 953 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 ADGRF1Q5T601 910 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 DCUN1D2Q6PH85 259 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 SLC23A3Q6PIS1 610 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 SND1Q7KZF4 910 aaKnown RBP eCLIP9.21□□□□□ -0.94
DDX56-211ENST00000479602 SLFN11Q7Z7L1 901 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 PIP4P1Q86T03 277 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 TMEM25Q86YD3 366 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 MIB1Q86YT6 1006 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 CCDC33Q8N5R6 958 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 ALLCQ8N6M5 410 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 KDF1Q8NAX2 398 aaPredicted RBP9.21□□□□□ -0.94
DDX56-211ENST00000479602 TXNDC5Q8NBS9 432 aaKnown RBP9.21□□□□□ -0.94
DDX56-211ENST00000479602 JOSD2Q8TAC2 188 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 RXFP2Q8WXD0 754 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 MCEEQ96PE7 176 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 PRMT1Q99873 361 aaKnown RBP9.21□□□□□ -0.94
DDX56-211ENST00000479602 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.21□□□□□ -0.94
DDX56-211ENST00000479602 SLC2A11Q9BYW1 496 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 SEPT11Q9NVA2 429 aaKnown RBP9.21□□□□□ -0.94
DDX56-211ENST00000479602 DDIT4Q9NX09 232 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 SMPD4Q9NXE4 827 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 DONSONQ9NYP3 566 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 PPARGC1AQ9UBK2 798 aaKnown RBP9.21□□□□□ -0.94
DDX56-211ENST00000479602 NAALADL1Q9UQQ1 740 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 INVSQ9Y283 1065 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 PCDHA13Q9Y5I0 950 aa9.21□□□□□ -0.94
DDX56-211ENST00000479602 CABIN1Q9Y6J0 2220 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms