RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 FCRL2Q96LA5 508 aaPredicted RBP13.78□□□□□ -0.2
ABCF1-206ENST00000479542 CEP63Q96MT8 703 aa13.78□□□□□ -0.2
ABCF1-206ENST00000479542 NT5C1BQ96P26 610 aa13.78□□□□□ -0.2
ABCF1-206ENST00000479542 FAM129BQ96TA1 746 aa13.78□□□□□ -0.2
ABCF1-206ENST00000479542 NEUROG2Q9H2A3 272 aa13.78□□□□□ -0.2
ABCF1-206ENST00000479542 ERVW-1Q9UQF0 538 aa13.78□□□□□ -0.2
ABCF1-206ENST00000479542 ASXL3Q9C0F0 2248 aa13.78□□□□□ -0.2
ABCF1-206ENST00000479542 GOLGA6L7A0A1B0GV03 622 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 SLC7A4O43246 635 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 MAGEC1O60732 1142 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 LUC7L3O95232 432 aaKnown RBP13.77□□□□□ -0.21
ABCF1-206ENST00000479542 LCP1P13796 627 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 SLC8A1P32418 973 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 HNF1BP35680 557 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 GPD2P43304 727 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 ECT2LQ008S8 904 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 SULT2A1Q06520 285 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 KCNJ12Q14500 433 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 RTP5Q14D33 572 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 SLC45A4Q5BKX6 768 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 DCAF17Q5H9S7 520 aaPredicted RBP13.77□□□□□ -0.21
ABCF1-206ENST00000479542 NCEH1Q6PIU2 408 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 IGSF10Q6WRI0 2623 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 CACUL1Q86Y37 369 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 SMYD4Q8IYR2 804 aaPredicted RBP13.77□□□□□ -0.21
ABCF1-206ENST00000479542 FMR1NBQ8N0W7 255 aaPredicted RBP13.77□□□□□ -0.21
ABCF1-206ENST00000479542 MFSD2AQ8NA29 543 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 HNRNPLLQ8WVV9 542 aaKnown RBP13.77□□□□□ -0.21
ABCF1-206ENST00000479542 TMEM131Q92545 1883 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 PRICKLE1Q96MT3 831 aaPredicted RBP13.77□□□□□ -0.21
ABCF1-206ENST00000479542 PPP1R9BQ96SB3 815 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 ZSWIM1Q9BR11 485 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 NRSN2Q9GZP1 204 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 EBF2Q9HAK2 575 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 GDF3Q9NR23 364 aa13.77□□□□□ -0.21
ABCF1-206ENST00000479542 RNF225M0QZC1 329 aaPredicted RBP13.76□□□□□ -0.21
ABCF1-206ENST00000479542 KCNK3O14649 394 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 ENC1O14682 589 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 MID1O15344 667 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 SMC2O95347 1197 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 IGLV3-25P01717 112 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 NNMTP40261 264 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 ARRB1P49407 418 aaPredicted RBP13.76□□□□□ -0.21
ABCF1-206ENST00000479542 RPS24P62847 133 aaKnown RBP13.76□□□□□ -0.21
ABCF1-206ENST00000479542 CDH18Q13634 790 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 ELAVL3Q14576 367 aaKnown RBP13.76□□□□□ -0.21
ABCF1-206ENST00000479542 SHBQ15464 509 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 PITRM1Q5JRX3 1037 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 TMEM110Q86TL2 294 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 DQX1Q8TE96 717 aaKnown RBP13.76□□□□□ -0.21
ABCF1-206ENST00000479542 RFFLQ8WZ73 363 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 PTPRN2Q92932 1015 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 DHTKD1Q96HY7 919 aaPredicted RBP13.76□□□□□ -0.21
ABCF1-206ENST00000479542 BTN2A3PQ96KV6 586 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 TIGD1Q96MW7 591 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 OMDQ99983 421 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 GDPD2Q9HCC8 539 aa13.76□□□□□ -0.21
ABCF1-206ENST00000479542 TLR4O00206 839 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 RFPL3O75679 317 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 LDOC1O95751 146 aaPredicted RBP13.75□□□□□ -0.21
ABCF1-206ENST00000479542 WNT1P04628 370 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 ITGAVP06756 1048 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 SLC2A3P11169 496 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 PMS1P54277 932 aaKnown RBP13.75□□□□□ -0.21
ABCF1-206ENST00000479542 PNOCQ13519 176 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 DCAF6Q58WW2 860 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 FSCBQ5H9T9 825 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 C6orf118Q5T5N4 469 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 TTC39BQ5VTQ0 682 aaPredicted RBP13.75□□□□□ -0.21
ABCF1-206ENST00000479542 SFMBT2Q5VUG0 894 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 DHRS13Q6UX07 377 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 MMAAQ8IVH4 418 aaKnown RBP13.75□□□□□ -0.21
ABCF1-206ENST00000479542 PPM1KQ8N3J5 372 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 NXPE2Q96DL1 559 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 SLC6A18Q96N87 628 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 MED15Q96RN5 788 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 SLC4A5Q9BY07 1137 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.75□□□□□ -0.21
ABCF1-206ENST00000479542 STIM2Q9P246 746 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 SERGEFQ9UGK8 458 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 HOOK1Q9UJC3 728 aaKnown RBP13.75□□□□□ -0.21
ABCF1-206ENST00000479542 DMTF1Q9Y222 760 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 PCDHB4Q9Y5E5 795 aa13.75□□□□□ -0.21
ABCF1-206ENST00000479542 A0A1W2PP55 124 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 M0QYV0 167 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 PSMA7O14818 248 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 ALOX15BO15296 676 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 RNGTTO60942 597 aaKnown RBP13.74□□□□□ -0.21
ABCF1-206ENST00000479542 RNASEH2AO75792 299 aaKnown RBP13.74□□□□□ -0.21
ABCF1-206ENST00000479542 GLI1P08151 1106 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 JUPP14923 745 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 ABCB4P21439 1286 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 EPHA8P29322 1005 aaPredicted RBP13.74□□□□□ -0.21
ABCF1-206ENST00000479542 ACADVLP49748 655 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 RGS7P49802 495 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 ADPRHP54922 357 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 MARSP56192 900 aaKnown RBP13.74□□□□□ -0.21
ABCF1-206ENST00000479542 NXPH1P58417 271 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 NUCB2P80303 420 aa13.74□□□□□ -0.21
ABCF1-206ENST00000479542 STIM1Q13586 685 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms