RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 IGLV3-19P01714 112 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 PSMD8P48556 350 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 KLK7P49862 253 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 PTK2Q05397 1052 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 DRAP1Q14919 205 aaPredicted RBP17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 VWA3BQ502W6 1294 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 KCNT1Q5JUK3 1230 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 OTUD1Q5VV17 481 aaPredicted RBP17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 OLFML1Q6UWY5 402 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 C14orf80Q86SX3 495 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 CCAR2Q8N163 923 aaKnown RBP17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 STK40Q8N2I9 435 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 CHCHD4Q8N4Q1 142 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 ATP6V0D2Q8N8Y2 350 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 CADM4Q8NFZ8 388 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 BIRC7Q96CA5 298 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 BTN2A3PQ96KV6 586 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 SLC2A13Q96QE2 648 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 PRMT1Q99873 361 aaKnown RBP17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 TUBGCP2Q9BSJ2 902 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 BTBD1Q9H0C5 482 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 SIK2Q9H0K1 926 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 NUP62CLQ9H1M0 184 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 ANLNQ9NQW6 1124 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 DNAAF2Q9NVR5 837 aaKnown RBP17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 SUN2Q9UH99 717 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 VANGL2Q9ULK5 521 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 PCDHGC3Q9UN70 934 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 PLXNB3Q9ULL4 1909 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 CEP295Q9C0D2 2601 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 KRT9P35527 623 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 CDK17Q00537 523 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 IL9RQ01113 521 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 EIF4EBP2Q13542 120 aaPredicted RBP17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 HNRNPA1L2Q32P51 320 aaKnown RBP17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 POM121L1PQ3SYA9 428 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 C9orf64Q5T6V5 341 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 FBXL22Q6P050 247 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 UNQ6494/PRO21346Q6UXR6 183 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 PHLDB2Q86SQ0 1253 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 NAXDQ8IW45 347 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 CCDC117Q8IWD4 279 aaPredicted RBP17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 C1orf216Q8TAB5 229 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 RPRD1AQ96P16 312 aaPredicted RBP17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 SYNCQ9H7C4 482 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 FBXL12Q9NXK8 326 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 KIAA1522Q9P206 1035 aaPredicted RBP17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 SNX11Q9Y5W9 270 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 DOCK4Q8N1I0 1966 aa17.95■□□□□ 0.46
ECHDC1-216ENST00000479525 CFAP47Q6ZTR5 3102 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 GTPBP10A4D1E9 387 aaKnown RBP17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 GOLGA8CPA6NN73 597 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 M0QYT0 321 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 ECT2LQ008S8 904 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 KCNJ12Q14500 433 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 MEA1Q16626 185 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 HLA-BQ31612 363 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 TTC31Q49AM3 519 aaPredicted RBP17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 PRAMEF14Q5SWL7 426 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 CXorf57Q6NSI4 855 aaKnown RBP17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 C11orf57Q6ZUT1 292 aaPredicted RBP17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 SETD7Q8WTS6 366 aaKnown RBP17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 RSPH9Q9H1X1 276 aaPredicted RBP17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 NEUROG2Q9H2A3 272 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 PDCL3Q9H2J4 239 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 PABPC3Q9H361 631 aaKnown RBP17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 EBF2Q9HAK2 575 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 TM9SF3Q9HD45 589 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 HS3ST4Q9Y661 456 aa17.94■□□□□ 0.46
ECHDC1-216ENST00000479525 GOLGA8SH3BPF8 625 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 I6L893 689 aaPredicted RBP17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 BNIP3LO60238 219 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 HSF2BPO75031 334 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 DAB1O75553 588 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 RNASEH2AO75792 299 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 CNTN5O94779 1100 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 ADCY5O95622 1261 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 ABCB4P21439 1286 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 MATKP42679 507 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 SULT1E1P49888 294 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 SLC6A3Q01959 620 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 E2F5Q15329 346 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 CST6Q15828 149 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 KIF19Q2TAC6 998 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 EFHC1Q5JVL4 640 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 RNF219Q5W0B1 726 aaPredicted RBP17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 NCEH1Q6PIU2 408 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 BEND5Q7L4P6 421 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 AADATQ8N5Z0 425 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 FAM129BQ96TA1 746 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 VPS16Q9H269 839 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 PIGVQ9NUD9 493 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 BTBD3Q9Y2F9 522 aa17.93■□□□□ 0.46
ECHDC1-216ENST00000479525 PAGE1O75459 146 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 MOCS3O95396 460 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 ASLP04424 464 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 IGHV4-34P06331 123 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 CCR1P32246 355 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms