RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 USP1O94782 785 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 TKTP29401 623 aaKnown RBP25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 ZNF135P52742 658 aaPredicted RBP25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 BTKQ06187 659 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 IQSEC1Q6DN90 963 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 NME8Q8N427 588 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 JADE3Q92613 823 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 FAM49AQ9H0Q0 323 aaPredicted RBP25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 SNX15Q9NRS6 342 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 SEPT10Q9P0V9 454 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 SLC45A1Q9Y2W3 748 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 PLXNB2O15031 1838 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 MBLAC1A4D2B0 266 aaPredicted RBP25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 M0QYT0 321 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 FBXO21O94952 628 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 ERVK-10P10266 1014 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 CRABP2P29373 138 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 METTL21CQ5VZV1 264 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 DPY19L2Q6NUT2 758 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 PID1Q7Z2X4 250 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 MAVSQ7Z434 540 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 GATA6Q92908 595 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 CLPTM1LQ96KA5 538 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 LRRC4Q9HBW1 653 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 CASS4Q9NQ75 786 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 GINS2Q9Y248 185 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 CYP2C9P11712 490 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 HADHAP40939 763 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 DSG1Q02413 1049 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 FSCBQ5H9T9 825 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 BSPRYQ5W0U4 402 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 PGM2L1Q6PCE3 622 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 SIX6OS1Q8N1H7 587 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 NLGN2Q8NFZ4 835 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 ACTRT2Q8TDY3 377 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 OSMRQ99650 979 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 CCDC28BQ9BUN5 200 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 MID2Q9UJV3 735 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 TRHDEQ9UKU6 1024 aa25.21■■□□□ 1.63
SYNGAP1-206ENST00000479510 AP3B1O00203 1094 aa25.2■■□□□ 1.62
SYNGAP1-206ENST00000479510 ADRA1BP35368 520 aa25.2■■□□□ 1.62
SYNGAP1-206ENST00000479510 CSE1LP55060 971 aaKnown RBP25.2■■□□□ 1.62
SYNGAP1-206ENST00000479510 ABHD16BQ9H3Z7 469 aa25.2■■□□□ 1.62
SYNGAP1-206ENST00000479510 PNPOQ9NVS9 261 aa25.2■■□□□ 1.62
SYNGAP1-206ENST00000479510 KLHL8Q9P2G9 620 aaPredicted RBP25.2■■□□□ 1.62
SYNGAP1-206ENST00000479510 VANGL2Q9ULK5 521 aa25.2■■□□□ 1.62
SYNGAP1-206ENST00000479510 ASB3Q9Y575 518 aa25.2■■□□□ 1.62
SYNGAP1-206ENST00000479510 C9IYK1 514 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 F5H423 210 aaPredicted RBP25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 CREB3O43889 395 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 AKAP5P24588 427 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 PTPN3P26045 913 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 MLH1P40692 756 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 GJA9P57773 515 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 PPIDQ08752 370 aaKnown RBP25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 SEMA3BQ13214 749 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 ZNF618Q5T7W0 954 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 OR52E8Q6IFG1 317 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 CLEC14AQ86T13 490 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 DCLK2Q8N568 766 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 UCMAQ8WVF2 138 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 CDHR5Q9HBB8 845 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 S100A14Q9HCY8 104 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 DLGAP2Q9P1A6 1054 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 TIMM44O43615 452 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 LILRA4P59901 499 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 TMEM62Q0P6H9 643 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 PPM1JQ5JR12 505 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 PDPK2PQ6A1A2 396 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 KBTBD2Q8IY47 623 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 ZC3H15Q8WU90 426 aaKnown RBP25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 STON2Q8WXE9 905 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 FCRL3Q96P31 734 aaPredicted RBP25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 VAT1Q99536 393 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 PDP2Q9P2J9 529 aa25.19■■□□□ 1.62
SYNGAP1-206ENST00000479510 APOA4P06727 396 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 PTPN1P18031 435 aaKnown RBP25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 DNAJB2P25686 324 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 NPY2RP49146 381 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 HK2P52789 917 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 LDLRAD1Q5T700 205 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 KCTD11Q693B1 232 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 ITPRIPL1Q6GPH6 555 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 STRA8Q7Z7C7 330 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 OSTM1Q86WC4 334 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 ECSITQ9BQ95 431 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 VCX3BQ9H321 246 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 PIGVQ9NUD9 493 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 RRN3Q9NYV6 651 aa25.18■■□□□ 1.62
SYNGAP1-206ENST00000479510 SMIM10L2AP0DMW4 78 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 SMIM10L2BP0DMW5 78 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 LRPAP1P30533 357 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 GJA5P36382 358 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 PITX1P78337 314 aaPredicted RBP25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 XIAPP98170 497 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 ITGA9Q13797 1035 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 ANKRD20A4Q4UJ75 823 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 LCA5Q86VQ0 697 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 OR52K1Q8NGK4 314 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms