RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 CCDC51Q96ER9 411 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 HEXIM2Q96MH2 286 aaKnown RBP4.24□□□□□ -1.73
COPS7B-220ENST00000479430 ACOX2Q99424 681 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 PI4K2AQ9BTU6 479 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 IRX2Q9BZI1 471 aaPredicted RBP4.24□□□□□ -1.73
COPS7B-220ENST00000479430 IKZF4Q9H2S9 585 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 CDIP1Q9H305 208 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 AKTIPQ9H8T0 292 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 ECT2Q9H8V3 914 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 PTPRHQ9HD43 1115 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 PRMT7Q9NVM4 692 aaPredicted RBP4.24□□□□□ -1.73
COPS7B-220ENST00000479430 GPATCH2Q9NW75 528 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 DUS2Q9NX74 493 aaKnown RBP4.24□□□□□ -1.73
COPS7B-220ENST00000479430 RAD54BQ9Y620 910 aa4.24□□□□□ -1.73
COPS7B-220ENST00000479430 NPHP3-ACAD11A0A0J9YXS1 232 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 KLHL33A6NCF5 533 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 CCDC169A6NNP5 214 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 LACTBL1A8MY62 500 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 TISP43B9A030 160 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 WASH3PC4AMC7 463 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 FAM47E-STBD1D6RA91 191 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 TMEM189-UBE2V1I3L0A0 370 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 hCG_1984214I3L0E3 225 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ACKR2O00590 384 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 TERTO14746 1132 aaKnown RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 WNT9AO14904 365 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 GSTA4O15217 222 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 SLC16A4O15374 487 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ARHGAP6O43182 974 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 AP1G1O43747 822 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 FOXD2O60548 495 aaPredicted RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ZRANB2O95218 330 aaKnown RBP eCLIP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 FAM87AP0C7U9 286 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 KRT15P19012 456 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 PAMP19021 973 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ACAT1P24752 427 aaKnown RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 HOXA6P31267 233 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 P2RY2P41231 377 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 MATR3P43243 847 aaKnown RBP eCLIP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 PEX3P56589 373 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 JAM2P57087 298 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 BNC1Q01954 994 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 GUCY1B3Q02153 619 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 YWHAHQ04917 246 aaPredicted RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 CCDC173Q0VFZ6 552 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 BFSP1Q12934 665 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 TOB2Q14106 344 aaPredicted RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 GBX1Q14549 363 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ACAP2Q15057 778 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 SAFBQ15424 915 aaKnown RBP eCLIP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ZRSR2Q15696 482 aaKnown RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 TAF12Q16514 161 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 CRY1Q16526 586 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 MAPK6Q16659 721 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ARHGAP44Q17R89 818 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ARHGAP15Q53QZ3 475 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 LYSMD4Q5XG99 296 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 PDXDC1Q6P996 788 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 DHRS13Q6UX07 377 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 Q6ZNB5 142 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 LPCAT2Q7L5N7 544 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 SYT13Q7L8C5 426 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 NEK8Q86SG6 692 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 RASSF3Q86WH2 238 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 CATSPER3Q86XQ3 398 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 SYT12Q8IV01 421 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 NAXDQ8IW45 347 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 GPR65Q8IYL9 337 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 CAMKK1Q8N5S9 505 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ZNF655Q8N720 491 aaPredicted RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ZNF713Q8N859 430 aaPredicted RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 TRIML1Q8N9V2 468 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 CCDC148Q8NFR7 591 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 SLC35G2Q8TBE7 412 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 BICD2Q8TD16 824 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 PARD3BQ8TEW8 1205 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 CCDC12Q8WUD4 166 aaPredicted RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 FAM46AQ96IP4 442 aaKnown RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 HSPA12BQ96MM6 686 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 PLIN2Q99541 437 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ELF4Q99607 663 aaPredicted RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ACO2Q99798 780 aaKnown RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 HSD17B14Q9BPX1 270 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 ADPGKQ9BRR6 497 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 TCHPQ9BT92 498 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 GLT8D2Q9H1C3 349 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 TASP1Q9H6P5 420 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 TTC12Q9H892 705 aaPredicted RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 SMURF1Q9HCE7 757 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 AP5S1Q9NUS5 200 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 SMPD4Q9NXE4 827 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 EBF1Q9UH73 591 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 PILRBQ9UKJ0 227 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 SNX14Q9Y5W7 946 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 MRFAP1Q9Y605 127 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 PTPN13Q12923 2485 aa4.23□□□□□ -1.73
COPS7B-220ENST00000479430 UTP20O75691 2785 aaKnown RBP4.23□□□□□ -1.73
COPS7B-220ENST00000479430 NYNRINQ9P2P1 1898 aaKnown RBP4.22□□□□□ -1.73
COPS7B-220ENST00000479430 TEP1Q99973 2627 aaKnown RBP4.22□□□□□ -1.73
COPS7B-220ENST00000479430 FAM95CA0A1B0GW59 222 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms