RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 FBRSQ9HAH7 460 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 STIM2Q9P246 746 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 LCMT1Q9UIC8 334 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 VANGL2Q9ULK5 521 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 MUC22E2RYF6 1773 aaPredicted RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 EP300Q09472 2414 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-217ENST00000479161 TMCO5BA8MYB1 307 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 E9PAM4 449 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 AXIN1O15169 862 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 CCP110O43303 1012 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 CYP1A2P05177 515 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 HOXB2P14652 356 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 L1CAMP32004 1257 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 CD70P32970 193 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF75DP51815 510 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 ATXN1P54253 815 aaKnown RBP15.94■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF177Q13360 481 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-217ENST00000479161 BYSLQ13895 437 aaKnown RBP15.94■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF234Q14588 700 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 PLEKHG6Q3KR16 790 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 FSCBQ5H9T9 825 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 SH3PXD2AQ5TCZ1 1133 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 MBLAC2Q68D91 279 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 CXorf57Q6NSI4 855 aaKnown RBP15.94■□□□□ 0.14
C9orf3-217ENST00000479161 TMC6Q7Z403 805 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 SLFN11Q7Z7L1 901 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 PHLDB2Q86SQ0 1253 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 C14orf80Q86SX3 495 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 CARNMT1Q8N4J0 409 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 GAB3Q8WWW8 586 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF653Q96CK0 615 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 ALG14Q96F25 216 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 SIK2Q9H0K1 926 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 OR12D3Q9UGF7 316 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 INTS6Q9UL03 887 aaKnown RBP15.94■□□□□ 0.14
C9orf3-217ENST00000479161 STON1Q9Y6Q2 735 aa15.94■□□□□ 0.14
C9orf3-217ENST00000479161 ANTXRLA6NF34 631 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 ZBTB24O43167 697 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-217ENST00000479161 RNF8O76064 485 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 GJB6O95452 261 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 LMNAP02545 664 aaKnown RBP15.93■□□□□ 0.14
C9orf3-217ENST00000479161 PCK1P35558 622 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 EIF4A3P38919 411 aaKnown RBP15.93■□□□□ 0.14
C9orf3-217ENST00000479161 FNTBP49356 437 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF135P52742 658 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-217ENST00000479161 OGDHQ02218 1023 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 PIGHQ14442 188 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-217ENST00000479161 STARD3Q14849 445 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 PTPRNQ16849 979 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 CDO1Q16878 200 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 PITRM1Q5JRX3 1037 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 CCDC122Q5T0U0 273 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 NIPA2Q8N8Q9 360 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 SUMF1Q8NBK3 374 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 ZC3H10Q96K80 434 aaKnown RBP15.93■□□□□ 0.14
C9orf3-217ENST00000479161 ACOX2Q99424 681 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 CIPCQ9C0C6 399 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 ZYG11BQ9C0D3 744 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 DONSONQ9NYP3 566 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF212Q9UDV6 495 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 SUN2Q9UH99 717 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 OR51B4Q9Y5P0 310 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 GPR179Q6PRD1 2367 aa15.93■□□□□ 0.14
C9orf3-217ENST00000479161 ILVBLA1L0T0 632 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 HRO43593 1189 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 HOXC13P31276 330 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 CSKP41240 450 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 IL12RB1P42701 662 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 ADKP55263 362 aaKnown RBP15.92■□□□□ 0.14
C9orf3-217ENST00000479161 DMWDQ09019 674 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 CAMK2GQ13555 558 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-217ENST00000479161 FUT11Q495W5 492 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 USP39Q53GS9 565 aaKnown RBP15.92■□□□□ 0.14
C9orf3-217ENST00000479161 SPDYCQ5MJ68 293 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 C6orf118Q5T5N4 469 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 TC2NQ8N9U0 490 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 LOXL4Q96JB6 756 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 CCDC42Q96M95 316 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 HHIPQ96QV1 700 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 FEM1AQ9BSK4 669 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 FAM86C1Q9NVL1 165 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 CACNA2D2Q9NY47 1150 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 UVRAGQ9P2Y5 699 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 INTUQ9ULD6 942 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 FZD10Q9ULW2 581 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 R4GN57 208 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 WDR87Q6ZQQ6 2873 aa15.92■□□□□ 0.14
C9orf3-217ENST00000479161 CFAP54Q96N23 3096 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 H2AFZP0C0S5 128 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 RHOQP17081 205 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 FECHP22830 423 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 PSMA2P25787 234 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 ETFBP38117 255 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 MAPKAPK2P49137 400 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 GALCP54803 685 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 ECT2LQ008S8 904 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF252P-AS1Q0IIN9 211 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 SEMA3BQ13214 749 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 EFHC2Q5JST6 749 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms