RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 HOXC6P09630 235 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 UBL4AP11441 157 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 PHKA2P46019 1235 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 PTPN11Q06124 597 aaPredicted RBP11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 ENPEPQ07075 957 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 PRKG1Q13976 671 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 TEX44Q53QW1 395 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 EEF1DP3Q658K8 133 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 NIPAL1Q6NVV3 410 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 POTEHQ6S545 545 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 ZNF410Q86VK4 478 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 GRAMD2AQ8IUY3 354 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 C12orf29Q8N999 325 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 GOLM1Q8NBJ4 401 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 CEP41Q9BYV8 373 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 ACSS2Q9NR19 701 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 SIRPGQ9P1W8 387 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 PAK5Q9P286 719 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 SOX13Q9UN79 622 aa11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 MAGED2Q9UNF1 606 aaPredicted RBP11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
LRRFIP1-211ENST00000478958 A0A088AWK7 358 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 K7EPI3 171 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 CHADO15335 359 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 MED7O43513 233 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 FAM189A1O60320 539 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 MTRF1O75570 445 aaKnown RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 BPGMP07738 259 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 NFICP08651 508 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 CHRNB1P11230 501 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 CDH5P33151 784 aaPredicted RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 STAT5BP51692 787 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 ATP1A4Q13733 1029 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 DNAL1Q4LDG9 190 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 NBPF12Q5TAG4 269 aaPredicted RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 WDR78Q5VTH9 848 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 FASTKD5Q7L8L6 764 aaKnown RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 UBE2Q1Q7Z7E8 422 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 FAM20CQ8IXL6 584 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 ADGRF2Q8IZF7 708 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 CENPSQ8N2Z9 138 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 RNF157Q96PX1 679 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 ACO2Q99798 780 aaKnown RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 ELOVL4Q9GZR5 314 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 IRF2BPLQ9H1B7 796 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 CNGB3Q9NQW8 809 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 PNPOQ9NVS9 261 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 ZNF214Q9UL59 606 aaPredicted RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 KLF11O14901 512 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 EIF2S1P05198 315 aaKnown RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 PEX2P28328 305 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 TFDP2Q14188 446 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 STXBP2Q15833 593 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 N4BP2L1Q5TBK1 243 aaPredicted RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 CES3Q6UWW8 571 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 RAVER1Q8IY67 606 aaKnown RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 SLC4A11Q8NBS3 891 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 EFHD2Q96C19 240 aaPredicted RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 PAIP1Q9H074 479 aaKnown RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 MYOZ2Q9NPC6 264 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 RSL24D1Q9UHA3 163 aaKnown RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 PGAP2Q9UHJ9 254 aa11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 APOBEC2Q9Y235 224 aaKnown RBP11.32□□□□□ -0.6
LRRFIP1-211ENST00000478958 TBKBP1A7MCY6 615 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 SPAG6O75602 509 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 SERPINA6P08185 405 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 MSL3P1P0C860 447 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 PTPN2P17706 415 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 GPD1P21695 349 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 PRKACBP22694 351 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 HSPA1LP34931 641 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 ATXN3P54252 364 aaPredicted RBP11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 ATXN1P54253 815 aaKnown RBP11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 SESN2P58004 480 aaPredicted RBP11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 GBE1Q04446 702 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 CXCL9Q07325 125 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 CD300CQ08708 224 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 LAMTOR4Q0VGL1 99 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 TRIP10Q15642 601 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 TAZQ16635 292 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 GRAMD1BQ3KR37 738 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 DCAF6Q58WW2 860 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 PPM1JQ5JR12 505 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 EFHC1Q5JVL4 640 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 XRRA1Q6P2D8 792 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 RNF111Q6ZNA4 994 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 HPS6Q86YV9 775 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 ESX1Q8N693 406 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 RNF169Q8NCN4 708 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 FNIP1Q8TF40 1166 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 DDI1Q8WTU0 396 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 PCYT2Q99447 389 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 FRMD8P1Q9BZ68 369 aaPredicted RBP11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 LIN28AQ9H9Z2 209 aaKnown RBP11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 ZNF358Q9NW07 568 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 MOSPD1Q9UJG1 213 aa11.31□□□□□ -0.6
LRRFIP1-211ENST00000478958 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms