RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 COL24A1Q17RW2 1714 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 RGSL1A5PLK6 1076 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 NEMP1O14524 444 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 VAPBO95292 243 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 ALOX5P09917 674 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 SNHG28P0DPA3 235 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 YAP1P46937 504 aaKnown RBP21.7■■□□□ 1.06
SDF4-206ENST00000478938 CLK3P49761 638 aaKnown RBP21.7■■□□□ 1.06
SDF4-206ENST00000478938 GPC3P51654 580 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 KRT76Q01546 638 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 DGKDQ16760 1214 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 KRT39Q6A163 491 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 CHSY3Q70JA7 882 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 GET4Q7L5D6 327 aaPredicted RBP21.7■■□□□ 1.06
SDF4-206ENST00000478938 TAS2R42Q7RTR8 314 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 HERC6Q8IVU3 1022 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 ABHD11Q8NFV4 315 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 SUN5Q8TC36 379 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 SH3YL1Q96HL8 342 aaPredicted RBP21.7■■□□□ 1.06
SDF4-206ENST00000478938 FAM96AQ9H5X1 160 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 MTMR4Q9NYA4 1195 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 IP6K2Q9UHH9 426 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 IPO11Q9UI26 975 aaKnown RBP21.7■■□□□ 1.06
SDF4-206ENST00000478938 DGKBQ9Y6T7 804 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 ZHX2Q9Y6X8 837 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 CLDN25C9JDP6 229 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 TBX3O15119 743 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 GMPRP36959 345 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 CSE1LP55060 971 aaKnown RBP21.7■■□□□ 1.06
SDF4-206ENST00000478938 ABCE1P61221 599 aaKnown RBP21.7■■□□□ 1.06
SDF4-206ENST00000478938 SMTNL2Q2TAL5 461 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 ZNF394Q53GI3 561 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 TTC23LQ6PF05 361 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 EPGNQ6UW88 154 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 DAW1Q8N136 415 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 TTC39CQ8N584 583 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 ZNF781Q8N8C0 355 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 CRYGNQ8WXF5 182 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 HSD17B14Q9BPX1 270 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 MUC3BQ9H195 1237 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 WDR55Q9H6Y2 383 aaPredicted RBP21.7■■□□□ 1.06
SDF4-206ENST00000478938 WRAP73Q9P2S5 460 aaPredicted RBP21.7■■□□□ 1.06
SDF4-206ENST00000478938 PCDHA1Q9Y5I3 950 aa21.7■■□□□ 1.06
SDF4-206ENST00000478938 UNCXA6NJT0 531 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 SAC3D1A6NKF1 404 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 UBL4AP11441 157 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 RAD23AP54725 363 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 TXNRD3Q86VQ6 643 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 ZC3H15Q8WU90 426 aaKnown RBP21.69■■□□□ 1.06
SDF4-206ENST00000478938 PPWD1Q96BP3 646 aaKnown RBP21.69■■□□□ 1.06
SDF4-206ENST00000478938 MARK4Q96L34 752 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 MEIS2O14770 477 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 RGS13O14921 159 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 CYP3A4P08684 503 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 C4orf22Q6V702 233 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 PIWIL3Q7Z3Z3 882 aaKnown RBP21.69■■□□□ 1.06
SDF4-206ENST00000478938 GALNT13Q8IUC8 556 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 SLC38A6Q8IZM9 456 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 FAM110BQ8TC76 370 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 FAM20AQ96MK3 541 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 IMPG2Q9BZV3 1241 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 TRIT1Q9H3H1 467 aaKnown RBP21.69■■□□□ 1.06
SDF4-206ENST00000478938 NOL6Q9H6R4 1146 aaKnown RBP21.69■■□□□ 1.06
SDF4-206ENST00000478938 POPDC2Q9HBU9 364 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 ADA2Q9NZK5 511 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 TMEM9Q9P0T7 183 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 PI4KBQ9UBF8 816 aa21.69■■□□□ 1.06
SDF4-206ENST00000478938 TRIM64A6NGJ6 449 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 ZNF839A8K0R7 811 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 NTSR2O95665 410 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 PRKCHP24723 683 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 OGDHQ02218 1023 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 ZNF846Q147U1 533 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 MOXD1Q6UVY6 613 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 FAM20CQ8IXL6 584 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 OFCC1Q8IZS5 231 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 VCPIP1Q96JH7 1222 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 CNOT6Q9ULM6 557 aaKnown RBP21.68■■□□□ 1.06
SDF4-206ENST00000478938 PCDHGA8Q9Y5G5 932 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 AURKAO14965 403 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 TEX28O15482 410 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 PLIN3O60664 434 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 LDHBP07195 334 aaKnown RBP21.68■■□□□ 1.06
SDF4-206ENST00000478938 MX2P20592 715 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 GLDCP23378 1020 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 MYF6P23409 242 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 EEF1DP29692 281 aaKnown RBP21.68■■□□□ 1.06
SDF4-206ENST00000478938 PTPN9P43378 593 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 NOVP48745 357 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 NOMO3P69849 1222 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 ART3Q13508 389 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 BFSP2Q13515 415 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 FBXL13Q8NEE6 735 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 BPIFB6Q8NFQ5 453 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 FBXL20Q96IG2 436 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 CSF3RQ99062 836 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 TCF7L2Q9NQB0 619 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 GDAP2Q9NXN4 497 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 SLC17A6Q9P2U8 582 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 SFMBT1Q9UHJ3 866 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms