RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CCDC117Q8IWD4 279 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 SCAMP5Q8TAC9 235 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 NSMCE1Q8WV22 266 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 WDR60Q8WVS4 1066 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 USP13Q92995 863 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 PAAF1Q9BRP4 392 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 TWSG1Q9GZX9 223 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 FOXP1Q9H334 677 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 EPS8L2Q9H6S3 715 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 PI4KBQ9UBF8 816 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 SHANK2Q9UPX8 1470 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 GCC2Q8IWJ2 1684 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 CAMSAP1Q5T5Y3 1602 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 PNMA6EA0A0J9YXQ4 647 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 A0A1B0GVC2 190 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 A8MVJ9 347 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 EIF3FO00303 357 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 WDR47O94967 919 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 GYS1P13807 737 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 PRF1P14222 555 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 CD53P19397 219 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 KLRK1P26718 216 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 MAPK9P45984 424 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 LINC00205P59089 165 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 CSHL1Q14406 222 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 ST3GAL2Q16842 350 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 TTC22Q5TAA0 569 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 MEX3CQ5U5Q3 659 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 RINT1Q6NUQ1 792 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 NFRKBQ6P4R8 1299 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 TMEM65Q6PI78 240 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 CLEC9AQ6UXN8 241 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 RINLQ6ZS11 566 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 ZDHHC17Q8IUH5 632 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 HERC6Q8IVU3 1022 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 SFTPA1Q8IWL2 248 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 CLASRPQ8N2M8 674 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 FSTL5Q8N475 847 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 METTL25Q8N6Q8 603 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 ADAMTS15Q8TE58 950 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 COQ8BQ96D53 544 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 DAPP1Q9UN19 280 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 STRCQ7RTU9 1775 aa4.58□□□□□ -1.68
CDC42BPA-212ENST00000478573 KDM5AP29375 1690 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 MROH1Q8NDA8 1641 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 PRDM15P57071 1507 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 RTEL1-TNFRSF6BF6WH68 1400 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 MIA2Q96PC5 1412 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 CNTLNQ9NXG0 1405 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 TRAPPC8Q9Y2L5 1435 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 CCNB3Q8WWL7 1395 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 IGKV2D-30A0A075B6S6 120 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 B9A039 149 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 BTBD19C9JJ37 291 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 EXOC5O00471 708 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 TK1P04183 234 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 TMEM191BP0C7N4 346 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 GKP32189 559 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 MSANTD2Q6P1R3 559 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 PIK3AP1Q6ZUJ8 805 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 TRABD2AQ86V40 505 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 FTSJ3Q8IY81 847 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 TEX19Q8NA77 164 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 OR6Y1Q8NGX8 325 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 OVCA2Q8WZ82 227 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 RUBCNQ92622 972 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 CTHRC1Q96CG8 243 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 WDYHV1Q96HA8 205 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 HS6ST2Q96MM7 605 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 PYM1Q9BRP8 204 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 G6PC2Q9NQR9 355 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 RASSF1Q9NS23 344 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 NKX1-2Q9UD57 310 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 FEM1BQ9UK73 627 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 C19orf53Q9UNZ5 99 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 CNTN6Q9UQ52 1028 aa4.57□□□□□ -1.68
CDC42BPA-212ENST00000478573 KDM5DQ9BY66 1539 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 A2MP01023 1474 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 TCOF1Q13428 1488 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 LMTK3Q96Q04 1460 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 MBD5Q9P267 1494 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 MYOM3Q5VTT5 1437 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 CCDC187A0A096LP49 1063 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 HMX3A6NHT5 357 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 EFCAB8A8MWE9 144 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 H0Y3Z8 333 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 CTIFO43310 598 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 PMPCBO75439 489 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 WDHD1O75717 1129 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 RPP40O75818 363 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 MT-CO3P00414 261 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 MCM2P49736 904 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 PAPOLAP51003 745 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 DGKQP52824 942 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 PRKAA2P54646 552 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 EIF4A1P60842 406 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 LMAN2Q12907 356 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 KCNJ12Q14500 433 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 RALBP1Q15311 655 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms