RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ARHGAP44Q17R89 818 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 SLC45A4Q5BKX6 768 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 ZC3H12AQ5D1E8 599 aaKnown RBP14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 RAP1GAP2Q684P5 730 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 KIAA0895LQ68EN5 471 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 RAB44Q7Z6P3 723 aaPredicted RBP14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 ZDHHC17Q8IUH5 632 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 ADAMTS14Q8WXS8 1223 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 SHC3Q92529 594 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 IGSF8Q969P0 613 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 BIRC7Q96CA5 298 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 PPP1R13BQ96KQ4 1090 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 CRACR2AQ9BSW2 395 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 TM9SF3Q9HD45 589 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 DDIT4Q9NX09 232 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 RRN3Q9NYV6 651 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 PCOLCE2Q9UKZ9 415 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 ERVW-1Q9UQF0 538 aa14.93□□□□□ -0.02
SMARCE1-209ENST00000478349 ITIH6Q6UXX5 1313 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 LAMA1P25391 3075 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 FAM221BA6H8Z2 402 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 SIN3BO75182 1162 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 GADD45BO75293 160 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 RNASEH2AO75792 299 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 CALCAP01258 141 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 IGLV3-25P01717 112 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 GRK6P43250 576 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 CSNK1EP49674 416 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 RACK1P63244 317 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 ACBD5Q5T8D3 534 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 SYPL2Q5VXT5 272 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 C11orf57Q6ZUT1 292 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 DHX40Q8IX18 779 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 CFAP52Q8N1V2 620 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 MSANTD4Q8NCY6 345 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 C1orf216Q8TAB5 229 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 LMLNQ96KR4 655 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 PDCL3Q9H2J4 239 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 SLC25A13Q9UJS0 675 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 KLK13Q9UKR3 277 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 PCDHGC3Q9UN70 934 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 ANKRD6Q9Y2G4 727 aa14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 FNDC3AQ9Y2H6 1198 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-209ENST00000478349 FAM47DPA6NHR8 397 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 YKT6O15498 198 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 C5AR1P21730 350 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 CAMK4Q16566 473 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 MAN2A1Q16706 1144 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 FAM46CQ5VWP2 391 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 SND1Q7KZF4 910 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 MMAAQ8IVH4 418 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 CHCHD4Q8N4Q1 142 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 C1orf131Q8NDD1 294 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 OR2T34Q8NGX1 318 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 RHBDD1Q8TEB9 315 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 MRGPRX3Q96LB0 322 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 CAMK1GQ96NX5 476 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 RPRD1AQ96P16 312 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 SLC2A13Q96QE2 648 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 SPAG5Q96R06 1193 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 TMEM121BQ9BXQ6 578 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 ADAMTS1Q9UHI8 967 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 STAP1Q9ULZ2 295 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 CKAP5Q14008 2032 aa14.91□□□□□ -0.02
SMARCE1-209ENST00000478349 SYNJ2BP-COX16A0A087WUM0 186 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 A0A1W2PP55 124 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 A0A1W2PPC4 97 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 MID1O15344 667 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 PCDHGA12O60330 932 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 CBFA2T3O75081 653 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 DAB1O75553 588 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 TOP3BO95985 862 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 SLC9A1P19634 815 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 SLC8A1P32418 973 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 NUDT1P36639 197 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 PSMD8P48556 350 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 CCR5P51681 352 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 FAM193AP78312 1265 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 CCDC15Q0P6D6 951 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 ZNF177Q13360 481 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 KIF19Q2TAC6 998 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 C9orf64Q5T6V5 341 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 OR6B2Q6IFH4 312 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 SLC26A9Q7LBE3 791 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 CCAR2Q8N163 923 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 OR8D1Q8WZ84 308 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 MYO19Q96H55 970 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 CCDC114Q96M63 670 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 IL21RQ9HBE5 538 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 COX16Q9P0S2 106 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 CYTH4Q9UIA0 394 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 INTS6Q9UL03 887 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 GON4LQ3T8J9 2241 aa14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 ASCC3Q8N3C0 2202 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-209ENST00000478349 MUC22E2RYF6 1773 aaPredicted RBP14.89□□□□□ -0.03
SMARCE1-209ENST00000478349 BECN2A8MW95 431 aa14.89□□□□□ -0.03
SMARCE1-209ENST00000478349 TTC34A8MYJ7 566 aa14.89□□□□□ -0.03
SMARCE1-209ENST00000478349 C1QTNF3-AMACRE9PGA6 284 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms