RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 CT47A1Q5JQC4 288 aaPredicted RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 EFHC1Q5JVL4 640 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 OTUD1Q5VV17 481 aaPredicted RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 RNF43Q68DV7 783 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 IL31Q6EBC2 164 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 ADIPOR2Q86V24 386 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 ERICH1Q86X53 443 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 TMPRSS6Q8IU80 811 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 RGL4Q8IZJ4 473 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 ATP6V0D2Q8N8Y2 350 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 SNIP1Q8TAD8 396 aaKnown RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 EPS8L1Q8TE68 723 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 SNX19Q92543 992 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 PRCCQ92733 491 aaPredicted RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 SIPA1Q96FS4 1042 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 TOE1Q96GM8 510 aaKnown RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 BTN2A3PQ96KV6 586 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 HSPA12BQ96MM6 686 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 GTPBP2Q9BX10 602 aaKnown RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 SIK2Q9H0K1 926 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 LHX5Q9H2C1 402 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 CD248Q9HCU0 757 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 METTL5Q9NRN9 209 aaKnown RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 TMEM74BQ9NUR3 256 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 SLC12A6Q9UHW9 1150 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 VANGL2Q9ULK5 521 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 PLA2G4CQ9UP65 541 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 CACNA1AO00555 2505 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 NCOR2Q9Y618 2525 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SPAG17Q6Q759 2223 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 LNP1A1A4G5 178 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 C4orf47A7E2U8 309 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 LGALS16A8MUM7 142 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 KCNU1A8MYU2 1149 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SLC30A4O14863 429 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 KHNYNO15037 678 aaKnown RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 ZNF217O75362 1048 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 IGLV3-25P01717 112 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 ATP5BP06576 529 aaKnown RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 DLDP09622 509 aaKnown RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 PDGFRAP16234 1089 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SDHBP21912 280 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 MAOBP27338 520 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 CCR1P32246 355 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SOX5P35711 763 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 STK19P49842 368 aaPredicted RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 IRAK1P51617 712 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 COPAP53621 1224 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SNX16P57768 344 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 ST8SIA6P61647 398 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 NOMO3P69849 1222 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 ZNF33AQ06730 810 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 PTPRNQ16849 979 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 PPM1JQ5JR12 505 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 PITRM1Q5JRX3 1037 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 RABGAP1LQ5R372 815 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 STPG1Q5TH74 334 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 RNF219Q5W0B1 726 aaPredicted RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SLC36A4Q6YBV0 504 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 BEND5Q7L4P6 421 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SLC26A9Q7LBE3 791 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 XYLT1Q86Y38 959 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SLC41A1Q8IVJ1 513 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 DHX40Q8IX18 779 aaKnown RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 APCDD1Q8J025 514 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 EMC1Q8N766 993 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 MSANTD4Q8NCY6 345 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 NEK11Q8NG66 645 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SLC30A5Q8TAD4 765 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 GANCQ8TET4 914 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 DDX1Q92499 740 aaKnown RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 IGSF8Q969P0 613 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 C18orf8Q96DM3 657 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 RPL10LQ96L21 214 aaKnown RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 RPRD1AQ96P16 312 aaPredicted RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 TBCBQ99426 244 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 C11orf70Q9BRQ4 267 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 RTKNQ9BST9 563 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 GPR174Q9BXC1 333 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 MIR1-1HGQ9H1L0 117 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 TMPRSS4Q9NRS4 437 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 PIGVQ9NUD9 493 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 ASNSD1Q9NWL6 643 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 LIMA1Q9UHB6 759 aaKnown RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 NOCTQ9UK39 431 aaKnown RBP8.56□□□□□ -1.04
ERCC8-205ENST00000477893 SIK3Q9Y2K2 1263 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 ABCA7Q8IZY2 2146 aa8.56□□□□□ -1.04
ERCC8-205ENST00000477893 THADAQ6YHU6 1953 aa8.55□□□□□ -1.04
ERCC8-205ENST00000477893 SPTBN2O15020 2390 aa8.55□□□□□ -1.04
ERCC8-205ENST00000477893 RALGAPA1Q6GYQ0 2036 aa8.55□□□□□ -1.04
ERCC8-205ENST00000477893 TTC34A8MYJ7 566 aa8.55□□□□□ -1.04
ERCC8-205ENST00000477893 NPC1O15118 1278 aa8.55□□□□□ -1.04
ERCC8-205ENST00000477893 TIMM44O43615 452 aa8.55□□□□□ -1.04
ERCC8-205ENST00000477893 PAGE1O75459 146 aa8.55□□□□□ -1.04
ERCC8-205ENST00000477893 ADCY5O95622 1261 aa8.55□□□□□ -1.04
ERCC8-205ENST00000477893 LSM8O95777 96 aaKnown RBP8.55□□□□□ -1.04
ERCC8-205ENST00000477893 GLI1P08151 1106 aa8.55□□□□□ -1.04
ERCC8-205ENST00000477893 SLC2A3P11169 496 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms