RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 AFMP43652 599 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 SLC11A2P49281 568 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 KCNC4Q03721 635 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 ADIGQ0VDE8 80 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 LY6DQ14210 128 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 CDCP2Q5VXM1 449 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 ERICH6BQ5W0A0 696 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 NUGGCQ68CJ6 796 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 MSANTD2Q6P1R3 559 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 LSMEM2Q8N112 164 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 IPO9Q96P70 1041 aaKnown RBP21■□□□□ 0.95
PDLIM1-202ENST00000477757 FAM129BQ96TA1 746 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 EXOC1Q9NV70 894 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 ERVW-1Q9UQF0 538 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 GOLGA6L7A0A1B0GV03 622 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 TTC34A8MYJ7 566 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 PYCARD-AS1I3L0S3 204 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 MAGEC1O60732 1142 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 YEATS4O95619 227 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 SRPRAP08240 638 aaKnown RBP20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 NUDT1P36639 197 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 ERVPABLB-1P60509 514 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 GABREP78334 506 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 ENPEPQ07075 957 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 GOLGA7BQ2TAP0 167 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 INTS8Q75QN2 995 aaKnown RBP20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 GRAMD1CQ8IYS0 662 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 KCNE4Q8WWG9 221 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 TATDN2Q93075 761 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 FAM131CQ96AQ9 280 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 LRRC4Q9HBW1 653 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 ABCC13Q9NSE7 274 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 STIM2Q9P246 746 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 ARHGAP20Q9P2F6 1191 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 DMTF1Q9Y222 760 aa20.99■□□□□ 0.95
PDLIM1-202ENST00000477757 ACSL4O60488 711 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 MZF1P28698 734 aaPredicted RBP20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 DAB2P98082 770 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 PITRM1Q5JRX3 1037 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 UNC45BQ8IWX7 931 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 SIX6OS1Q8N1H7 587 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 SCML4Q8N228 414 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 OR4C6Q8NH72 309 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 DEPDC7Q96QD5 511 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 DPH1Q9BZG8 443 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 TMEM8AQ9HCN3 771 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 CYTH4Q9UIA0 394 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 TRAF3IP3Q9Y228 551 aa20.98■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3DA0A087WVF3 549 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3IA0A087WXS9 549 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3EA0A087X179 549 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3KA0A087X1G2 549 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TYW5A2RUC4 315 aaKnown RBP20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3FA6NER0 549 aaPredicted RBP20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3LB9A6J9 549 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 WISP1O95388 367 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3HP0C7X1 549 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 PDIA4P13667 645 aaKnown RBP20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 DRD3P35462 400 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 CTSOP43234 321 aaPredicted RBP20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 LSSP48449 732 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 VAC14Q08AM6 782 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 BST2Q10589 180 aaKnown RBP20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 CDH18Q13634 790 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 ELAVL3Q14576 367 aaKnown RBP20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3GQ6DHY5 549 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 NADSYN1Q6IA69 706 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3CQ6IPX1 549 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 PRPF39Q86UA1 669 aaKnown RBP20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TBC1D3Q8IZP1 549 aaPredicted RBP20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 STK40Q8N2I9 435 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 AZIN2Q96A70 460 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 MED8Q96G25 268 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 KDM4CQ9H3R0 1056 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 MMRN2Q9H8L6 949 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 POLR1BQ9H9Y6 1135 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 UPF2Q9HAU5 1272 aaKnown RBP20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 ASCL3Q9NQ33 180 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 TSPAN16Q9UKR8 245 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 SSUH2Q9Y2M2 353 aa20.97■□□□□ 0.95
PDLIM1-202ENST00000477757 BOD1L1Q8NFC6 3051 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 KLK10O43240 276 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 CALUO43852 315 aaPredicted RBP20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 SLC28A2O43868 658 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 OPA1O60313 960 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 RPS24P62847 133 aaKnown RBP20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 KMT5BQ4FZB7 885 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 FSCBQ5H9T9 825 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 MMS22LQ6ZRQ5 1243 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 TRIM69Q86WT6 500 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 SLC25A45Q8N413 288 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 SEMA4DQ92854 862 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 MYEOVQ96EZ4 313 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 CNGB3Q9NQW8 809 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 THSD1Q9NS62 852 aa20.96■□□□□ 0.95
PDLIM1-202ENST00000477757 A0A1B0GVM2 712 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 SLC7A4O43246 635 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 USP12O75317 370 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 IL1BP01584 269 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 CKMT1AP12532 417 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms