RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 KPNA1P52294 538 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-220ENST00000477528 TAF5Q15542 800 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 CDC26Q8NHZ8 85 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 P2RY11Q96G91 374 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 ENTPD7Q9NQZ7 604 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 VTI1BQ9UEU0 232 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 AURKCQ9UQB9 309 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 HEATR9A2RTY3 570 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 STX7O15400 261 aaKnown RBP14.95□□□□□ -0.02
HDAC6-220ENST00000477528 IRF1P10914 325 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 GBE1Q04446 702 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 SLC34A1Q06495 639 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 CXCL17Q6UXB2 119 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 SNX27Q96L92 541 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 RNPEPL1Q9HAU8 725 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 TLR8Q9NR97 1041 aaKnown RBP14.95□□□□□ -0.02
HDAC6-220ENST00000477528 CD274Q9NZQ7 290 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 GLI3P10071 1580 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 SOAT2O75908 522 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 MLNP12872 115 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 ACCSLQ4AC99 568 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 USP6NLQ92738 828 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 ADAM2Q99965 735 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 CYP4F12Q9HCS2 524 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 ANLNQ9NQW6 1124 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 GID8Q9NWU2 228 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 DLGAP2Q9P1A6 1054 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 FETUBQ9UGM5 382 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 RABGEF1Q9UJ41 708 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 PRRG1O14668 218 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 HOXA2O43364 376 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 CREB1P16220 341 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 NFKB1P19838 968 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 PAX3P23760 479 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 ALDH1A3P47895 512 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 FAM35AQ86V20 835 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 OLA1Q9NTK5 396 aaKnown RBP14.94□□□□□ -0.02
HDAC6-220ENST00000477528 ST3GAL5Q9UNP4 418 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 DOCK2Q92608 1830 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 UPP2O95045 317 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 KLRC2P26717 231 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 NNMTP40261 264 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 MAP3K10Q02779 954 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 ILF2Q12905 390 aaKnown RBP14.94□□□□□ -0.02
HDAC6-220ENST00000477528 KPNB1Q14974 876 aaKnown RBP14.94□□□□□ -0.02
HDAC6-220ENST00000477528 ZRANB3Q5FWF4 1079 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 PCID2Q5JVF3 399 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 ZNF470Q6ECI4 717 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 SLC22A9Q8IVM8 553 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 TMEM192Q8IY95 271 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 MAGEA13PA6NCF6 341 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 RAMP2O60895 175 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 GLP2RO95838 553 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 ITGA2BP08514 1039 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 ATXN3P54252 364 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-220ENST00000477528 GDF10P55107 478 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 ELAVL2Q12926 359 aaKnown RBP14.94□□□□□ -0.02
HDAC6-220ENST00000477528 PREPLQ4J6C6 727 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-220ENST00000477528 TFAP2DQ7Z6R9 452 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 DEFB107AQ8IZN7 70 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 ZBED2Q9BTP6 218 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 EIF2AQ9BY44 585 aaKnown RBP14.94□□□□□ -0.02
HDAC6-220ENST00000477528 GIT1Q9Y2X7 761 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 RGS20O76081 388 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 CYBBP04839 570 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 CHRM3P20309 590 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 RGS4P49798 205 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 OXCT1P55809 520 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 BNIP1Q12981 228 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 MTA1Q13330 715 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 NRBF2Q96F24 287 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 UROC1Q96N76 676 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 QKIQ96PU8 341 aaKnown RBP eCLIP14.94□□□□□ -0.02
HDAC6-220ENST00000477528 KCTD15Q96SI1 283 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-220ENST00000477528 GPR63Q9BZJ6 419 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 RIC8BQ9NVN3 520 aa14.94□□□□□ -0.02
HDAC6-220ENST00000477528 GOLGA8TH3BQL2 631 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 DNM1LO00429 736 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 TCF4P15884 667 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 ALDH7A1P49419 539 aaKnown RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 TBL3Q12788 808 aaKnown RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 FAM187BQ17R55 369 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 SNX30Q5VWJ9 437 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 VSTM1Q6UX27 236 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 PTAR1Q7Z6K3 402 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 ECHDC2Q86YB7 292 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 CMASQ8NFW8 434 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 MYLPFQ96A32 169 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 CCDC134Q9H6E4 229 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 GOLGA2P5Q9HBQ8 144 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 PKP3Q9Y446 797 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 PTPRJQ12913 1337 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 ARHGAP10A1A4S6 786 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 CRTAMO95727 393 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 SMPD1P17405 629 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 CYP3A5P20815 502 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 ARHGAP1Q07960 439 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 TARBP2Q15633 366 aaKnown RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 SLC39A12Q504Y0 691 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 PTRHD1Q6GMV3 140 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms