RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 M0QYV0 167 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 RNF103O00237 685 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 TRIM38O00635 465 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 DRD3P35462 400 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 IRAK1P51617 712 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 CXADRP78310 365 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 INAVAQ3KP66 663 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 DCAF6Q58WW2 860 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 SFMBT2Q5VUG0 894 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 RAP1GAP2Q684P5 730 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-219ENST00000476625 USP30Q70CQ3 517 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 TAC4Q86UU9 113 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 HJURPQ8NCD3 748 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-219ENST00000476625 OR2T34Q8NGX1 318 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 FIBINQ8TAL6 211 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 DQX1Q8TE96 717 aaKnown RBP12.4□□□□□ -0.42
HDAC6-219ENST00000476625 KLK6Q92876 244 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 ERCC4Q92889 916 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-219ENST00000476625 PTPRN2Q92932 1015 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 SEMA4CQ9C0C4 833 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 GDF3Q9NR23 364 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 UCKL1Q9NWZ5 548 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 ARHGAP20Q9P2F6 1191 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 HESX1Q9UBX0 185 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 SARDHQ9UL12 918 aa12.4□□□□□ -0.42
HDAC6-219ENST00000476625 TBC1D3DA0A087WVF3 549 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D3IA0A087WXS9 549 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D3EA0A087X179 549 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D3KA0A087X1G2 549 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D3FA6NER0 549 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-219ENST00000476625 LRRC72A6NJI9 287 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D3LB9A6J9 549 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TLR4O00206 839 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 CASC3O15234 703 aaKnown RBP12.39□□□□□ -0.43
HDAC6-219ENST00000476625 LUC7L3O95232 432 aaKnown RBP12.39□□□□□ -0.43
HDAC6-219ENST00000476625 LATS1O95835 1130 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 IL1BP01584 269 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 LTFP02788 710 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D3HP0C7X1 549 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 CMA1P23946 247 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 MZF1P28698 734 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-219ENST00000476625 HNF1BP35680 557 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 GGCXP38435 758 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 SYKP43405 635 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 SLC8A3P57103 927 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 ST8SIA6P61647 398 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 CDH18Q13634 790 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 MS4A13Q5J8X5 152 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 SYPL2Q5VXT5 272 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D3GQ6DHY5 549 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D3CQ6IPX1 549 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 LRRC69Q6ZNQ3 347 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 ERICH1Q86X53 443 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 SPACA3Q8IXA5 215 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D3Q8IZP1 549 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-219ENST00000476625 LGI2Q8N0V4 545 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 GUF1Q8N442 669 aaKnown RBP12.39□□□□□ -0.43
HDAC6-219ENST00000476625 OR52K2Q8NGK3 314 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 KCTD13Q8WZ19 329 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 GOLGA1Q92805 767 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 FBRSQ9HAH7 460 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 CPNE5Q9HCH3 593 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 FZD3Q9NPG1 666 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 CNGB3Q9NQW8 809 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 ADAMTS1Q9UHI8 967 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 CEP83Q9Y592 693 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 PCDHGA1Q9Y5H4 931 aa12.39□□□□□ -0.43
HDAC6-219ENST00000476625 ITIH6Q6UXX5 1313 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 ARID1BQ8NFD5 2236 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-219ENST00000476625 FFAR2O15552 330 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 SIGLEC6O43699 453 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 VDRP11473 427 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 PDGFRAP16234 1089 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 GLDCP23378 1020 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 GTF2H1P32780 548 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 SLC11A2P49281 568 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 CENPCQ03188 943 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 TLE3Q04726 772 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 RTP5Q14D33 572 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 TMEM270Q6UE05 265 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 KRBA2Q6ZNG9 492 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 ARHGEF19Q8IW93 802 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 ENGASEQ8NFI3 743 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 SNIP1Q8TAD8 396 aaKnown RBP12.38□□□□□ -0.43
HDAC6-219ENST00000476625 SLC35F5Q8WV83 523 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 GDPD2Q9HCC8 539 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 TJP2Q9UDY2 1190 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 ZDHHC9Q9Y397 364 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 PCDHB4Q9Y5E5 795 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 TENM4Q6N022 2769 aa12.38□□□□□ -0.43
HDAC6-219ENST00000476625 EDDM13A0A1B0GTR0 161 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 PMS2P1A4D2B8 440 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 E9PAM4 449 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 RNASEH1O60930 286 aaKnown RBP12.37□□□□□ -0.43
HDAC6-219ENST00000476625 MPOP05164 745 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 SETSIPP0DME0 302 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 EPB41P11171 864 aaKnown RBP12.37□□□□□ -0.43
HDAC6-219ENST00000476625 PRLRP16471 622 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms