RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), human

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-208	ENST00000476590	RFX7	Q2KHR2	1363 aa		4.25	□□□□□ -1.73
CD55-208	ENST00000476590	CC2D2A	Q9P2K1	1620 aa		4.25	□□□□□ -1.73
CD55-208	ENST00000476590	MED23	Q9ULK4	1368 aa		4.25	□□□□□ -1.73
CD55-208	ENST00000476590	PCM1	Q15154	2024 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	LRRC53	A6NM62	1247 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	C12orf71	A8MTZ7	269 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590		F5H423	210 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ERVH48-1	M5A8F1	160 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	PSMD12	O00232	456 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GABRD	O14764	452 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CCNT2	O60583	730 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	NOS1AP	O75052	506 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CDK14	O94921	469 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	HEXB	P07686	556 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	UBTFL1	P0CB47	393 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	AMPD1	P23109	780 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CYP3A7	P24462	503 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GRK2	P25098	689 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	PBLD	P30039	288 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	HOXA6	P31267	233 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	FDFT1	P37268	417 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	BMX	P51813	675 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	AP1S2	P56377	157 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	RAB14	P61106	215 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ACTR3	P61158	418 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	EEF1A1	P68104	462 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GTF2I	P78347	998 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	IFI35	P80217	286 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	EEF1A2	Q05639	463 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	STRN3	Q13033	797 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TAF5	Q15542	800 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	OASL	Q15646	514 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	KYNU	Q16719	465 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TAF1B	Q53T94	588 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ZNF618	Q5T7W0	954 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	EEF1A1P5	Q5VTE0	462 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TMEM132E	Q6IEE7	984 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	STYK1	Q6J9G0	422 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TTI2	Q6NXR4	508 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ALKBH5	Q6P6C2	394 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SPOCD1	Q6ZMY3	1216 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SETD3	Q86TU7	594 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TRIM22	Q8IYM9	498 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	OR6C4	Q8NGE1	309 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	OR6S1	Q8NH40	331 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MGARP	Q8TDB4	240 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ZNF606	Q8WXB4	792 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ESR2	Q92731	530 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GLG1	Q92896	1179 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	FOXJ1	Q92949	421 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	LPP	Q93052	612 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ATP2A3	Q93084	1043 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GJA10	Q969M2	543 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ATP6V1E2	Q96A05	226 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ALKBH8	Q96BT7	664 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	NSL1	Q96IY1	281 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CYTH2	Q99418	400 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TLR10	Q9BXR5	811 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TXLNGY	Q9BZA5	131 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	EDEM3	Q9BZQ6	932 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	NEUROG2	Q9H2A3	272 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	KCNK13	Q9HB14	408 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TBC1D22B	Q9NU19	505 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TINAG	Q9UJW2	476 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TMEM59L	Q9UK28	342 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SPATA2	Q9UM82	520 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CLEC4A	Q9UMR7	237 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	JAG2	Q9Y219	1238 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GINS2	Q9Y248	185 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CBY1	Q9Y3M2	126 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	NEU2	Q9Y3R4	380 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	AFG3L2	Q9Y4W6	797 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	PCDHGA2	Q9Y5H1	932 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CLIC4	Q9Y696	253 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	USP32	Q8NFA0	1604 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MAGI3	Q5TCQ9	1506 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SERTM1	A2A2V5	107 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SLC9B1P1	A6NJY1	282 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MEI4	A8MW99	385 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	FAM155A	B1AL88	458 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	BTBD18	B2RXH4	712 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CHURC1-FNTB	B4DL54	471 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590		J3QRK9	145 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	PLK4	O00444	970 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	LAD1	O00515	517 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CES2	O00748	559 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	NIPSNAP2	O75323	286 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ABLIM3	O94929	683 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SLITRK5	O94991	958 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SNX4	O95219	450 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MOCS3	O95396	460 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	KRT8	P05787	483 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ATP5B	P06576	529 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CPB1	P15086	417 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	NPR1	P16066	1061 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SYN1	P17600	705 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TYK2	P29597	1187 aa		4.24	□□□□□ -1.73

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