RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 CEP135Q66GS9 1140 aa18.6■□□□□ 0.57
RNF220-212ENST00000475378 LSMEM2Q8N112 164 aa18.6■□□□□ 0.57
RNF220-212ENST00000475378 RNF139Q8WU17 664 aa18.6■□□□□ 0.57
RNF220-212ENST00000475378 KCNE4Q8WWG9 221 aa18.6■□□□□ 0.57
RNF220-212ENST00000475378 MYEOVQ96EZ4 313 aa18.6■□□□□ 0.57
RNF220-212ENST00000475378 PRICKLE1Q96MT3 831 aaPredicted RBP18.6■□□□□ 0.57
RNF220-212ENST00000475378 ASCL3Q9NQ33 180 aa18.6■□□□□ 0.57
RNF220-212ENST00000475378 ERVW-1Q9UQF0 538 aa18.6■□□□□ 0.57
RNF220-212ENST00000475378 BSNQ9UPA5 3926 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 EDDM13A0A1B0GTR0 161 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 XPO1O14980 1071 aaKnown RBP18.59■□□□□ 0.57
RNF220-212ENST00000475378 CUTAO60888 179 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 TRIM49P0CI25 452 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 TRIM49CP0CI26 452 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 DRD3P35462 400 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 CTSOP43234 321 aaPredicted RBP18.59■□□□□ 0.57
RNF220-212ENST00000475378 AFMP43652 599 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 LSSP48449 732 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 VAC14Q08AM6 782 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 OVGP1Q12889 678 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 NADSYN1Q6IA69 706 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 MSANTD2Q6P1R3 559 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 GRAMD1CQ8IYS0 662 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 MED8Q96G25 268 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 DPH1Q9BZG8 443 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 ZSCAN16Q9H4T2 348 aaPredicted RBP18.59■□□□□ 0.57
RNF220-212ENST00000475378 CISHQ9NSE2 258 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 ABCC13Q9NSE7 274 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 STIM2Q9P246 746 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 FRMD4BQ9Y2L6 1034 aa18.59■□□□□ 0.57
RNF220-212ENST00000475378 TBC1D3DA0A087WVF3 549 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 TBC1D3IA0A087WXS9 549 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 TBC1D3EA0A087X179 549 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 TBC1D3KA0A087X1G2 549 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.58■□□□□ 0.56
RNF220-212ENST00000475378 TBC1D3FA6NER0 549 aaPredicted RBP18.58■□□□□ 0.56
RNF220-212ENST00000475378 TBC1D3LB9A6J9 549 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 KLK10O43240 276 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 ACSL4O60488 711 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 ADH1BP00325 375 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 SRPRAP08240 638 aaKnown RBP18.58■□□□□ 0.56
RNF220-212ENST00000475378 TBC1D3HP0C7X1 549 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 MZF1P28698 734 aaPredicted RBP18.58■□□□□ 0.56
RNF220-212ENST00000475378 ADIGQ0VDE8 80 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 FSCBQ5H9T9 825 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 PITRM1Q5JRX3 1037 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 TBC1D3GQ6DHY5 549 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 TBC1D3CQ6IPX1 549 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 MMS22LQ6ZRQ5 1243 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 PRPF39Q86UA1 669 aaKnown RBP18.58■□□□□ 0.56
RNF220-212ENST00000475378 TBC1D3Q8IZP1 549 aaPredicted RBP18.58■□□□□ 0.56
RNF220-212ENST00000475378 STK40Q8N2I9 435 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 OR4C6Q8NH72 309 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 PTPRN2Q92932 1015 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 TATDN2Q93075 761 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 FAXDC2Q96IV6 333 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 POLR1BQ9H9Y6 1135 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 LRRC4Q9HBW1 653 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 CYTH4Q9UIA0 394 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 SLCO3A1Q9UIG8 710 aa18.58■□□□□ 0.56
RNF220-212ENST00000475378 UBR5O95071 2799 aaPredicted RBP18.58■□□□□ 0.56
RNF220-212ENST00000475378 SLC28A2O43868 658 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 OPA1O60313 960 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 MAGEC1O60732 1142 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 USP12O75317 370 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 GIMD1P0DJR0 217 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 METAP1P53582 386 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 SLC8A3P57103 927 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 RPS24P62847 133 aaKnown RBP18.57■□□□□ 0.56
RNF220-212ENST00000475378 DAB2P98082 770 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 GOLGA7BQ2TAP0 167 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 UNC45BQ8IWX7 931 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 SCML4Q8N228 414 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 TTC39CQ8N584 583 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 HJURPQ8NCD3 748 aaPredicted RBP18.57■□□□□ 0.56
RNF220-212ENST00000475378 SEMA4DQ92854 862 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 AZIN2Q96A70 460 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 KDM4CQ9H3R0 1056 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 TSPAN16Q9UKR8 245 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 DMTF1Q9Y222 760 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 TRAF3IP3Q9Y228 551 aa18.57■□□□□ 0.56
RNF220-212ENST00000475378 A0A1B0GVM2 712 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 CKMT1AP12532 417 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 PDIA4P13667 645 aaKnown RBP18.56■□□□□ 0.56
RNF220-212ENST00000475378 DGKAP23743 735 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 NUDT1P36639 197 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 SLC11A2P49281 568 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 DAOAP59103 153 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 SKOR1P84550 965 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 ENPEPQ07075 957 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 NUGGCQ68CJ6 796 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 IGF2-ASQ6U949 168 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.56■□□□□ 0.56
RNF220-212ENST00000475378 INTS8Q75QN2 995 aaKnown RBP18.56■□□□□ 0.56
RNF220-212ENST00000475378 CCDC150Q8NCX0 1101 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 VCPIP1Q96JH7 1222 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 IPO9Q96P70 1041 aaKnown RBP18.56■□□□□ 0.56
RNF220-212ENST00000475378 DEPDC7Q96QD5 511 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 TMEM8AQ9HCN3 771 aa18.56■□□□□ 0.56
RNF220-212ENST00000475378 UCKL1Q9NWZ5 548 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms